List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 1596

tRNA synthetase
This group has 49 members: 49 [B]acteria
Fingerprint: KVNTNEL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Acidothermus cellulolyticus (strain ATCC 43068 / 11B)ACIC100711  UniProtKB/Swiss-Prot SYE_ACIC1  glutamyl-tRNA synthetase TIGRFAM: glutamyl-tRNA synthetase PFAM: glutamyl-tRNA synthetase, class Ic KEGG: pac:PPA1869 glutamyl-tRNA synthetase
[B] Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD01352  UniProtKB/Swiss-Prot SYE_KINRD  Glutamyl-tRNA synthetase
[B] Phytoplasma sp. (strain STRAWB1)STRAW02690  UniProtKB/Swiss-Prot SYE_STRAW  Glutamyl-tRNA synthetase
[B] Streptomyces coelicolorSTRCO05515  UniProtKB/Swiss-Prot SYE_STRCO  SC1C2.28, gltX, glutamyl-tRNA synthetase, len: 494 aa; highly similar to many e.g. SYE_ECOLI glutamyl-tRNA synthetase (EC 6.1.1.17) (471 aa), fasta scores; opt: 453 z-score: 894.0 E(): 0, 37.1% identity in 493 aa overlap. Contains Pfam match to entry PF00749 tRNA-synt_1c, tRNA synthetases class I (E and Q), score 470.50, E-value 1.3e-137 glutamyl-tRNA synthetase
[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG01805  UniProtKB/Swiss-Prot SYE_STRGG  Putative glutamyl-tRNA synthetase
[B] Symbiobacterium thermophilumSYMTH00016  UniProtKB/Swiss-Prot SYE_SYMTH  glutamyl-tRNA synthetase
[B] Aquifex aeolicusAQUAE00847  UniProtKB/Swiss-Prot SYE_AQUAE  Glutamyl-tRNA synthetase
[B] Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)CYTH303303  UniProtKB/Swiss-Prot SYE_CYTH3  glutamate tRNA synthetase, catalytic subunit
[B] Acaryochloris marina (strain MBIC 11017)ACAM104884  UniProtKB/Swiss-Prot SYE_ACAM1  Glutamyl-tRNA synthetase
[B] Synechococcus sp. (strain CC9605)SYNSC00630  UniProtKB/Swiss-Prot SYE_SYNSC  glutamyl-tRNA synthetase
[B] Synechococcus sp. (strain JA-2-3B'a(2-13))SYNJB01612  UniProtKB/Swiss-Prot SYE_SYNJB  glutamyl-tRNA synthetase identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464
[B] Synechococcus sp. (strain PCC 6301)SYNP601707  UniProtKB/Swiss-Prot SYE_SYNP6  glutamyl-tRNA synthetase
[B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102)NOSP701248   ACC80068.1  Transcriptional regulator, Fis family
[B] Prochlorococcus marinus (strain NATL2A)PROMT00505  UniProtKB/Swiss-Prot SYE_PROMT  Glutamyl-tRNA synthetase
[B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD01209  UniProtKB/TrEMBL B8E0A6  Glutamyl-tRNA synthetase
[B] Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)CARHZ02254  UniProtKB/Swiss-Prot SYE_CARHZ  identified by similarity to SP:P22250; match to protein family HMM PF00749; match to protein family HMM TIGR00464 glutamyl-tRNA synthetase
[B] Desulfotomaculum reducens (strain MI-1)DESRM00181  UniProtKB/Swiss-Prot SYE_DESRM  Glutamate--tRNA(Gln) ligase , glutamyl-tRNA synthetase
[B] Lactobacillus reuteri (strain DSM 20016)LACRD01149  UniProtKB/Swiss-Prot SYE_LACRD  Glutamyl-tRNA synthetase
[B] Lactobacillus reuteri (strain JCM 1112)LACRJ01109  UniProtKB/Swiss-Prot SYE_LACRJ  glutamyl-tRNA synthase
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK02983  UniProtKB/TrEMBL B9JAG5  Glutamyl-tRNA synthetase protein
[B] Sinorhizobium medicae (strain WSM419)SINMW02747  UniProtKB/Swiss-Prot SYE_SINMW  Glutamyl-tRNA synthetase
[B] Wolbachia pipientis wMelWOLPM00382  UniProtKB/Swiss-Prot SYE1_WOLPM  Identified by similarity to EGAD:16197; match to TIGR00464 protein family HMM TIGR00464; match to PF00749 protein family HMM PF00749 glutamyl-tRNA synthetase
[B] Wolbachia sp. subsp. Drosophila simulans (strain wRi)WOLWR00240  UniProtKB/TrEMBL C0R5T5  Glutamyl-tRNA synthetase
[B] Burkholderia ambifaria (strain MC40-6)BURA401931  UniProtKB/Swiss-Prot SYE_BURA4  Glutamyl-tRNA synthetase
[B] Burkholderia cenocepacia (strain AU 1054)BURCA05943  UniProtKB/Swiss-Prot SYE_BURCA  Glutamyl-tRNA synthetase
[B] Burkholderia cenocepacia (strain HI2424)BURCH02043  UniProtKB/Swiss-Prot SYE_BURCH  glutamyl-tRNA synthetase TIGRFAM: glutamyl-tRNA synthetase PFAM: glutamyl-tRNA synthetase, class Ic KEGG: bcn:Bcen_6021 glutamyl-tRNA synthetase
[B] Burkholderia cenocepacia (strain MC0-3)BURCC02049  UniProtKB/Swiss-Prot SYE_BURCC  Glutamyl-tRNA synthetase
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM02077  UniProtKB/Swiss-Prot SYE_BURCM  glutamyl-tRNA synthetase TIGRFAM: glutamyl-tRNA synthetase PFAM: glutamyl-tRNA synthetase, class Ic KEGG: bur:Bcep18194_A5365 glutamyl-tRNA synthetase
[B] Burkholderia cepacia (strain J2315 / LMG 16656)BURCJ02028  UniProtKB/Swiss-Prot SYE_BURCJ  glutamyl-tRNA synthetase
[B] Burkholderia multivorans (strain ATCC 17616 / 249)BURM102236  UniProtKB/Swiss-Prot SYE_BURM1  Glutamyl-tRNA synthetase
[B] Burkholderia sp. (strain 383)BURS302172   ABB08959.1  Glutamyl-tRNA synthetase
[B] Burkholderia vietnamiensis (strain G4 / LMG 22486)BURVG01890  UniProtKB/Swiss-Prot SYE_BURVG  Glutamyl-tRNA synthetase
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP801361  UniProtKB/Swiss-Prot SYE_BURP8  Glutamyl-tRNA synthetase
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA01921  UniProtKB/Swiss-Prot SYE_BURTA  glutamyl-tRNA synthetase identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464
[B] Acidovorax sp. (strain JS42)ACISJ02529  UniProtKB/Swiss-Prot SYE_ACISJ  glutamyl-tRNA synthetase TIGRFAM: glutamyl-tRNA synthetase PFAM: glutamyl-tRNA synthetase, class Ic KEGG: rfr:Rfer_2681 glutamyl-tRNA synthetase
[B] Nitrosomonas europaeaNITEU01578  UniProtKB/Swiss-Prot SYE_NITEU  gltX; glutamate-tRNA synthetase (catalytic subunit)(sye protein)
[B] Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)DESVH02528  UniProtKB/Swiss-Prot SYE_DESVH  identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464 glutamyl-tRNA synthetase
[B] Desulfovibrio vulgaris subsp. vulgaris (strain DP4)DESVV00695  UniProtKB/Swiss-Prot SYE_DESVV  Glutamyl-tRNA synthetase
[B] Lawsonia intracellularis (strain PHE/MN1-00)LAWIP00461  UniProtKB/Swiss-Prot SYE_LAWIP  Glutamyl-and glutaminyl-tRNA synthetases
[B] Helicobacter pyloriHELPY00471  UniProtKB/Swiss-Prot SYE1_HELPY  similar to GB:M13687 SP:P04805 GB:X55737 GB:X63976 PID:148256 percent identity: 43.14; identified by sequence similarity; putative glutamyl-tRNA synthetase (gltX)
[B] Helicobacter pylori (strain G27)HELPG00421  UniProtKB/Swiss-Prot SYE1_HELPG  Glutamyl-tRNA synthetase
[B] Helicobacter pylori (strain HPAG1)HELPH00453  UniProtKB/Swiss-Prot SYE1_HELPH  glutamyl-tRNA synthetase
[B] Helicobacter pylori (strain Shi470)HELPS00450  UniProtKB/Swiss-Prot SYE1_HELPS  Glutamyl-tRNA synthetase
[B] Leptospira interrogansLEPIN04152  UniProtKB/Swiss-Prot SYE_LEPIN  Glutamyl-tRNA synthetase
[B] Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni)LEPIC03233  UniProtKB/Swiss-Prot SYE_LEPIC  identified by sequence similarity; putative; ORF located using Blastx/Glimmer glutamyl-tRNA synthetase
[B] Mycoplasma pneumoniaeMYCPN00676  UniProtKB/Swiss-Prot SYE_MYCPN  Glutamyl-tRNA synthetase
[B] Thermotoga maritimaTHEMA01330  UniProtKB/Swiss-Prot SYE1_THEMA  Glutamyl-tRNA synthetase 1
[B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP101415  UniProtKB/Swiss-Prot SYE2_THEP1  Glutamyl-tRNA synthetase
[B] Thermotoga sp. (strain RQ2)THESQ01460  UniProtKB/Swiss-Prot SYE2_THESQ  Glutamyl-tRNA synthetase