List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 250566

4a-hydroxytetrahydrobiopterin dehydratase cytoplasmic protein
This group has 10 members: 6 [A]rchaea 4 [B]acteria
Fingerprint: TVEIYTH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Sulfolobus islandicus (strain L.S.2.15 / Lassen #1)SULIL00005  UniProtKB/TrEMBL C3MIV2  
[A] Sulfolobus islandicus (strain M.14.25 / Kamchatka #1)SULIM00005  UniProtKB/Swiss-Prot PHS_SULIM  
[A] Sulfolobus islandicus (strain M.16.27)SULIA00005  UniProtKB/Swiss-Prot PHS_SULIA  
[A] Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1)SULIY00005  UniProtKB/TrEMBL C3N7T1  
[A] Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2)SULIN00005  UniProtKB/TrEMBL C3NJ37  
[A] Sulfolobus solfataricusSULSO01956  UniProtKB/Swiss-Prot PHS_SULSO  Putative pterin-4-alpha-carbinolamine dehydratase
[B] Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)LEPBJ02812  UniProtKB/TrEMBL Q04N96  4a-hydroxytetrahydrobiopterin dehydratase cytoplasmic protein
[B] Leptospira borgpetersenii serovar Hardjo-bovis (strain L550)LEPBL02856  UniProtKB/TrEMBL Q04WH6  4a-hydroxytetrahydrobiopterin dehydratase cytoplasmic protein
[B] Leptospira interrogansLEPIN04655  UniProtKB/TrEMBL Q8EX79  Pterin-4-alpha-carbinolamine dehydratase
[B] Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni)LEPIC03620  UniProtKB/TrEMBL Q75FD8  identified by sequence similarity; putative; ORF located using Blastx/Glimmer pterin-4-alpha-carbinolamine dehydratase