List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 382848

putative LPS biosynthesis related glycosyltransferase
This group has 4 members: 4 [B]acteria
Fingerprint: KENTREW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN03365  UniProtKB/TrEMBL Q5L9S6  Similar to Helicobacter pylori alpha1,3-fucosyltransferase FucT SWALL:O30511 (EMBL:AF008596) (478 aa) fasta scores: E(): 4.1e-20, 36.02% id in 322 aa, and to Helicobacter pylori fucosyltransferase HP0651 SWALL:O25366 (EMBL:AE000578) (476 aa) fasta scores: E(): 5.4e-20, 36.77% id in 310 aa putative LPS biosynthesis related glycosyltransferase
[B] Rickettsia bellii (strain OSU 85-389)RICB800524  UniProtKB/TrEMBL A8GVS3  Alpha-(1,3)-fucosyltransferase
[B] Rickettsia bellii (strain RML369-C)RICBR00490  UniProtKB/TrEMBL Q1RJ80  Alpha-(1,3)-fucosyltransferase
[B] Anaeromyxobacter dehalogenans (strain 2CP-C)ANADE03045  UniProtKB/TrEMBL Q2IE19  putative LPS biosynthesis related glycosyltransferase