List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 185039

identified by sequence similarity; putative; ORF located using
This group has 15 members: 15 [B]acteria
Fingerprint: IYPSHDL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus amyloliquefaciens (strain FZB42)BACA201729  UniProtKB/TrEMBL A7Z5A2  XynD
[B] Bacillus subtilisBACSU01815  UniProtKB/Swiss-Prot XYND_BACSU  Endo-1,4-beta-xylanase
[B] Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)CLOB804872  UniProtKB/TrEMBL A6M399  Alpha-N-arabinofuranosidase
[B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD200815  UniProtKB/TrEMBL Q21MJ5  Alpha-L-arabinofuranosidase
[B] Pseudoalteromonas atlantica (strain T6c / BAA-1087)PSEA603687  UniProtKB/TrEMBL Q15PF8  Alpha-L-arabinofuranosidase precursor
[B] Cellvibrio japonicus (strain Ueda107)CELJU01259  UniProtKB/TrEMBL B3PCV3  Beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43F
[B] Xanthomonas axonopodis (pv. citri)XANAC04143  UniProtKB/TrEMBL Q8PET2  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; arabinosidase xylosidase
[B] Xanthomonas campestris pv. campestrisXANCP04010  UniProtKB/TrEMBL Q8P3E9  Xylosidase/arabinosidase
[B] Xanthomonas campestris pv. campestris (strain 8004)XANC804100  UniProtKB/TrEMBL Q4UNX1  xylosidase/arabinosidase
[B] Xanthomonas campestris pv. campestris (strain B100)XANCB04319  UniProtKB/TrEMBL B0RZ18  Xylan 1,4-beta-xylosidase , alpha-N- arabinofuranosidase
[B] Xanthomonas campestris pv. vesicatoria (strain 85-10)XANC504271  UniProtKB/TrEMBL Q3BMB8  xylosidase
[B] Xanthomonas oryzae (pv. oryzae)XANOR03966  UniProtKB/TrEMBL Q5GUD6  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark xylosidase; arabinosidase
[B] Xanthomonas oryzae pv. oryzae (strain MAFF 311018)XANOM03847  UniProtKB/TrEMBL Q2NXP6  xylosidase arabinosidase identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker
[B] Xanthomonas oryzae pv. oryzae (strain PXO99A)XANOP00324  UniProtKB/TrEMBL B2SIE5  Beta-xylosidase
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP00373  UniProtKB/TrEMBL B1ZQZ8  Alpha-N-arabinofuranosidase