List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 189845

dihydrofolate reductase
This group has 11 members: 11 [B]acteria
Fingerprint: TIWHEKS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides fragilisBACFR03715  UniProtKB/TrEMBL Q64PV4  similar to gp:AE016934_129 [Bacteroides thetaiotaomicron VPI-5482], percent identity 82 in 163 aa, BLASTP E(): 2e-74 dihydrofolate reductase
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN03426  UniProtKB/TrEMBL Q5L9L5  Similar to Bacillus subtilis dihydrofolate reductase DfrA or BSU21810 SWALL:DYR_BACSU (SWALL:P11045) (168 aa) fasta scores: E(): 3.1e-19, 41.61% id in 161 aa, and to Neisseria gonorrhoeae dihydrofolate reductase FolA SWALL:DYR_NEIGO (SWALL:P04174) (162 aa) fasta scores: E(): 1.4e-20, 44.44% id in 162 aa putative dihydrofolate reductase
[B] Lactobacillus fermentum (strain IFO 3956 / LMG 18251)LACF300874  UniProtKB/TrEMBL B2GC42  Dihydrofolate reductase
[B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII901695  UniProtKB/TrEMBL B2ICT5  Dihydrofolate reductase
[B] Rhodopseudomonas palustris (strain HaA2)RHOP202031  UniProtKB/TrEMBL Q2IYG6  Dihydrofolate reductase
[B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC504472  UniProtKB/TrEMBL A8HYP1  Dihydrofolate reductase
[B] Burkholderia multivorans (strain ATCC 17616 / 249)BURM100304  UniProtKB/TrEMBL A9ADR8  Dihydrofolate reductase
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA01622  UniProtKB/TrEMBL Q2SXY8  dihydrofolate reductase identified by match to protein family HMM PF00186
[B] Buchnera aphidicola (subsp. Schizaphis graminum)BUCAP00133  UniProtKB/Swiss-Prot DYR_BUCAP  dihydrofolate reductase
[B] Phytoplasma mali (strain AT)PHYMT00287  UniProtKB/TrEMBL B3QZX1  Dihydrofolate reductase
[B] Phytoplasma australiensePHYAS00073  UniProtKB/TrEMBL B1V8Y8  Dihydrofolate reductase