List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 52065

semialdehyde dehydrogenase
This group has 6 members: 6 [B]acteria
Fingerprint: ITAEHRD

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Frankia sp. (strain EAN1pec)FRASN03785  UniProtKB/TrEMBL A8L4D6  Methylmalonate-semialdehyde dehydrogenase
[B] Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589)RENSM01719  UniProtKB/TrEMBL A9WMI1  Malonate-semialdehyde dehydrogenase
[B] Propionibacterium acnesPROAC00448  UniProtKB/TrEMBL Q6AAK3  methylmalonic acid semialdehyde dehydrogenase
[B] Streptomyces coelicolorSTRCO02706  UniProtKB/TrEMBL Q9L1J1  SCC46.11c, msdA, methylmalonic acid semialdehyde dehydrogenase, 500 aa; identical to previously sequenced TR:Q53935 (EMBL:L48550) Streptomyces coelicolor methylmalonic acid semialdehyde dehydrogenase MsdA and highly similar to SW:MMSA_PSEAE (EMBL:M84911) Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] (EC 1.2.1.27) MmsA, 496 aa; fasta scores: opt: 1652 z-score: 1799.5 E(): 0; 48.0% identity in 490 aa overlap. Contains Pfam match to entry PF00171 aldedh, Aldehyde dehydrogenase family and match to Prosite entry PS00070 Aldehyde dehydrogenases cysteine active site methylmalonic acid semialdehyde dehydrogenase
[B] Shewanella halifaxensis (strain HAW-EB4)SHEHH00982  UniProtKB/TrEMBL B0TVC1  Methylmalonate-semialdehyde dehydrogenase
[B] Shewanella piezotolerans (strain WP3 / JCM 13877)SHEPW03959  UniProtKB/TrEMBL B8CT63  Methylmalonate-semialdehyde dehydrogenase