List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 211126

A oxidase
This group has 6 members: 6 [E]ukaryota
Fingerprint: ISGYSAL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Ciona savignyiCIOSA04036  Ensembl ENSCSAVP00000011932   -
[E] Pristionchus pacificusPRIPA00374   WBGene00089928  status:Predicted
[E] Kluyveromyces lactisKLULA00438  UniProtKB/Swiss-Prot ACOX_KLULA  similar to sp|P13711 Saccharomyces cerevisiae YGL205w POX1 acyl-CoA oxidase singleton, start by similarity
[E] Saccharomyces cerevisiaeYEAST00777  UniProtKB/Swiss-Prot ACOX_YEAST  Acyl-coenzyme A oxidase
[E] Cryptococcus neoformansCRYNE03638  UniProtKB/TrEMBL Q5KEJ4  go_component: peroxisomal matrix [goid 0005782]; go_function: acyl-CoA oxidase activity [goid 0003997]; go_process: fatty acid beta-oxidation [goid 0006635] Acyl-coenzyme A oxidase I, putative
[E] Candida glabrataCANGA00153  UniProtKB/Swiss-Prot ACOX_CANGA  highly similar to uniprot|P13711 Saccharomyces cerevisiae YGL205w POX1;