List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 239314

putative hydrolase
This group has 4 members: 4 [B]acteria
Fingerprint: ILFRGLK

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Streptomyces coelicolorSTRCO00063  UniProtKB/TrEMBL Q9S1S4  SCJ4.49, possible hydrolase (putative secreted protein), len: 401aa; N-terminal region similar to that of TR:Q9Z4P9 (EMBL:AB024331) alpha-1,6-D-mannanase from Bacillus circulans (589 aa) fasta scores; opt: 218, z-score: 251.2, E(): 1.2e-06, (26.2% identity in 229 aa overlap) putative hydrolase (putative secreted protein)
[B] Bacteroides fragilisBACFR00331  UniProtKB/TrEMBL Q64ZJ6  similar to gp:AE016936_218 [Bacteroides thetaiotaomicron VPI-5482], percent identity 57 in 381 aa, BLASTP E(): e-132 putative hydrolase
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN00275  UniProtKB/TrEMBL Q5LIH2  Similar to Bacillus circulans alpha-1,6-mannanase precursor AmaN6 SWALL:Q9Z4P9 (EMBL:AB024331) (589 aa) fasta scores: E(): 1.6e-15, 27.24% id in 345 aa, and to Bacteroides thetaiotaomicron putative hydrolase BT2631 SWALL:AAO77738 (EMBL:AE016936) (385 aa) fasta scores: E(): 2.8e-91, 57.94% id in 390 aa, and to Bacteroides thetaiotaomicron putative hydrolase BT3782 SWALL:AAO78887 (EMBL:AE016942) (387 aa) fasta scores: E(): 2.6e-89, 58.02% id in 374 aa putative glycosylhydrolase
[B] Bacteroides thetaiotaomicronBACTN02601  UniProtKB/TrEMBL Q8A4G8  Glycoside hydrolase family 73