List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 267489

Glycoside hydrolase 15-related
This group has 8 members: 6 [A]rchaea 2 [B]acteria
Fingerprint: IKRYEND

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Caldivirga maquilingensis (strain DSMZ 13496 / IC-167)CALMQ00090  UniProtKB/TrEMBL A8M9R3  Glycoside hydrolase 15-related
[A] Methanocaldococcus jannaschiiMETJA01655  UniProtKB/Swiss-Prot Y1610_METJA  Uncharacterized glycosyl hydrolase MJ1610
[A] Methanococcoides burtonii (strain DSM 6242)METBU00395  UniProtKB/TrEMBL Q12YQ0  Glycoside hydrolase 15-related protein
[A] Methanosarcina acetivoransMETAC03869  UniProtKB/TrEMBL Q8TIU1  Glucan 1,4-alpha-glucosidase
[A] Methanosarcina barkeri (strain Fusaro / DSM 804)METBF00520  UniProtKB/TrEMBL Q46F21  glucoamylase
[A] Methanosarcina mazeiMETMA00852  UniProtKB/TrEMBL Q8PYJ7  Glucoamylase
[B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE00330  UniProtKB/TrEMBL B8I5Q4  glycoside hydrolase 15-related PFAM: glycoside hydrolase 15-related; KEGG: cth:Cthe_1787 glycoside hydrolase 15-related
[B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH01711  UniProtKB/TrEMBL A3DGC9  Glycoside hydrolase 15-related