List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 299858

Hypothetical protein
This group has 8 members: 8 [B]acteria
Fingerprint: IISSPIG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides fragilisBACFR00737  UniProtKB/TrEMBL Q64YE0  similar to gp:AE016935_39 [Bacteroides thetaiotaomicron VPI-5482], percent identity 80 in 483 aa, BLASTP E(): 0.0 Hypothetical protein
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN00630  UniProtKB/TrEMBL Q5LHH1  Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT2192 SWALL:AAO77299 (EMBL:AE016935) (484 aa) fasta scores: E(): 6.8e-175, 80.78% id in 484 aa, and to Clostridium perfringens hypothetical protein CPE1876 SWALL:Q8XJ85 (EMBL:AP003192) (750 aa) fasta scores: E(): 2e-72, 41.79% id in 457 aa, and to Bacteroides thetaiotaomicron conserved hypothetical protein BT4713 SWALL:AAO79818 (EMBL:AE016946) (580 aa) fasta scores: E(): 3.1e-69, 44.05% id in 429 aa conserved hypothetical exported protein
[B] Clostridium perfringensCLOPE00663  UniProtKB/TrEMBL Q8XMM5  Putative uncharacterized protein CPE0663
[B] Clostridium perfringens (strain SM101)CLOPS00610  UniProtKB/TrEMBL Q0SV83  F5/8 type C domain protein
[B] Xylella fastidiosaXYLFA00106  UniProtKB/TrEMBL Q9PH40  hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder hypothetical protein
[B] Xylella fastidiosa (strain M12)XYLFM00070  UniProtKB/TrEMBL B0U287  Alpha-L-fucosidase precursor
[B] Xylella fastidiosa (strain M23)XYLF200069  UniProtKB/TrEMBL B2I6A5  Alpha-L-fucosidase precursor
[B] Xylella fastidiosa (strain Temecula1 / ATCC 700964)XYLFT00070  UniProtKB/TrEMBL Q87F57  Putative uncharacterized protein