| [B] Frankia sp. (strain CcI3) | FRASC02576 | Q2J9M0 | Peptide deformylase |
| [B] Tropheryma whipplei (strain TW08/27) | TROW800438 | DEF_TROW8 | Similar to Thermus thermophilus peptide Deformylase Def SWALL:DEF_THETH (SWALL:P43522) (192 aa) fasta scores: E(): 6.4e-15, 38.69% id in 168 aa, and to Mycobacterium leprae peptide deformylase Def or ml1929 SWALL:DEF_MYCLE (SWALL:Q9CBI2) (197 aa) fasta scores: E(): 8.2e-20, 39.6% id in 202 aa peptide deformylase |
| [B] Tropheryma whipplei (strain Twist) | TROWT00308 | DEF_TROWT | formylmethionine deformylase |
| [B] Cyanothece sp. (strain PCC 7425 / ATCC 29141) | CYAP402258 | B8HY87 | Peptide deformylase |
| [B] Gloeobacter violaceus | GLOVI02220 | DEF2_GLOVI | polypeptide deformylase |
| [B] Synechococcus sp. (strain CC9605) | SYNSC02220 | DEF_SYNSC | Formylmethionine deformylase |
| [B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724) | DICTD01372 | DEF_DICTD | Peptide deformylase |
| [B] Bacillus anthracis | BACAN03668 | DEF1_BACAN | similar to SP:P94462; identified by sequence similarity; putative polypeptide deformylase |
| [B] Bacillus cereus (strain AH187) | BACC703705 | B7HLK0 | Peptide deformylase |
| [B] Bacillus cereus (strain ATCC 10987) | BACC103869 | Q732K3 | identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079 polypeptide deformylase |
| [B] Bacillus cereus (strain ATCC 14579 / DSM 31) | BACCR03667 | DEF1_BACCR | Polypeptide deformylase |
| [B] Bacillus cereus (strain G9842) | BACC203866 | B7IUM6 | Peptide deformylase |
| [B] Bacillus cereus (strain ZK) | BACCZ03589 | Q636F9 | peptide deformylase |
| [B] Bacillus thuringiensis (strain Al Hakam) | BACAH03307 | A0RHP0 | peptide deformylase |
| [B] Bacillus thuringiensis (subsp. konkukian) | BACHK03547 | Q6HEU8 | Structural feature(s) predicted by Psort:Transmembrane: 3705635 - 3705619 peptide deformylase |
| [B] Bacillus weihenstephanensis (strain KBAB4) | BACWK03592 | A9VTA5 | Peptide deformylase |
| [B] Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) | BREBN00864 | C0Z4W7 | Peptide deformylase |
| [B] Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) | NATTJ01290 | DEF_NATTJ | Peptide deformylase |
| [B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) | METSB01111 | DEF_METSB | Peptide deformylase |
| [B] Rhodopseudomonas palustris (strain BisA53) | RHOP500649 | DEF_RHOP5 | peptide deformylase KEGG: rpc:RPC_0803 peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase |
| [B] Rhodopseudomonas palustris (strain BisB5) | RHOPS00080 | DEF_RHOPS | Peptide deformylase |
| [B] Rhodopseudomonas palustris (strain HaA2) | RHOP200672 | DEF_RHOP2 | Peptide deformylase |
| [B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) | OCHA401323 | A6WYK7 | Peptide deformylase |
| [B] Methylobacterium nodulans (strain ORS2060 / LMG 21967) | METNO04455 | B8IFQ4 | Peptide deformylase |
| [B] Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) | METRJ03086 | B1M6N7 | Peptide deformylase |
| [B] Methylobacterium sp. (strain 4-46) | METS403964 | B0UP42 | Peptide deformylase |
| [B] Rhizobium loti | RHILO03733 | DEF_RHILO | N-formylmethionylaminoacyl-tRNA deformylase (EC 3.5.1.27) |
| [B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) | PARL100261 | A7HPQ1 | Peptide deformylase |
| [B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868) | AGRRK00508 | B9J8C4 | Peptide deformylase |
| [B] Agrobacterium tumefaciens (strain C58 / ATCC 33970) | AGRT500352 | DEF_AGRT5 | Peptide deformylase |
| [B] Rhizobium etli (strain CFN 42 / ATCC 51251) | RHIEC00397 | Q2KD52 | peptide deformylase protein similar to def1 (SMc01101) [Sinorhizobium meliloti] and AGR_C_640p [Agrobacterium tumefaciens] Similar to entrez-protein:Q92SH6 Putative location:bacterial cytoplasm Psort-Score: 0.4380; go_function: hydrolase activity [goid 0016787]; go_function: peptide deformylase activity [goid 0042586]; go_function: formylmethionine deformylase activity [goid 0008463]; go_process: protein biosynthesis [goid 0006412] |
| [B] Rhizobium etli (strain CIAT 652) | RHIE600445 | B3PZF4 | Peptide deformylase protein |
| [B] Rhizobium leguminosarum bv. trifolii (strain WSM2304) | RHILW00055 | B5ZN17 | Peptide deformylase |
| [B] Rhizobium leguminosarum bv. viciae (strain 3841) | RHIL300432 | Q1MM81 | putative peptide deformylase (polypeptide deformylase) similarity:fasta; with=UniProt:DEF_ECOLI (EMBL:H91147); Escherichia coli O157:H7.; def; Peptide deformylase (EC 3.5.1.88) (PDF) (Polypeptide deformylase).; length=168; id 47.337; 169 aa overlap; query 2-170; subject 1-166 similarity:fasta; with=UniProt:DEF_RHIME (EMBL:SME591783); Rhizobium meliloti (Sinorhizobium meliloti).; def; Peptide deformylase (EC 3.5.1.88) (PDF) (Polypeptide deformylase).; length=174; id 79.882; 169 aa overlap; query 1-169; subject 1-169 |
| [B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) | AZOC500795 | A8IQL9 | Polypeptide or peptide deformylase family protein |
| [B] Maricaulis maris (strain MCS10) | MARMM00439 | DEF_MARMM | Peptide deformylase |
| [B] Dinoroseobacter shibae (strain DFL 12) | DINSH00179 | A8LLB8 | Peptide deformylase |
| [B] Silicibacter pomeroyi | SILPO03136 | Q5LNI5 | identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079 peptide deformylase |
| [B] Silicibacter sp. (strain TM1040) | SILST02570 | Q1GDF4 | Peptide deformylase PFAM: formylmethionine deformylase: (2.5e-71) KEGG: sil:SPO3219 peptide deformylase, ev=6e-85, 88% identity |
| [B] Rhodospirillum centenum (strain ATCC 51521 / SW) | RHOCS02232 | B6IPI3 | Peptide deformylase, Def, putative |
| [B] Rickettsia akari (strain Hartford) | RICAH00286 | DEF_RICAH | Peptide deformylase |
| [B] Rickettsia massiliae (strain Mtu5) | RICM500201 | A8F0W4 | Polypeptide deformylase |
| [B] Rickettsia prowazekii | RICPR00200 | DEF_RICPR | METHIONYL-TRNA DEFORMYLASE (def) |
| [B] Rickettsia rickettsii (strain Iowa) | RICRO00304 | B0BWL0 | peptide deformylase |
| [B] Rickettsia rickettsii (strain Sheila Smith) | RICRS00293 | A8GR64 | Peptide deformylase |
| [B] Rickettsia typhi | RICTY00191 | DEF_RICTY | peptide deformylase |
| [B] Rickettsia conorii | RICCN00278 | DEF1_RICCN | Peptide deformylase 1 |
| [B] Bordetella avium (strain 197N) | BORA100201 | Q2L0L3 | peptide deformylase |
| [B] Acidovorax sp. (strain JS42) | ACISJ03787 | A1WD30 | peptide deformylase KEGG: pol:Bpro_4639 peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase |
| [B] Delftia acidovorans (strain DSM 14801 / SPH-1) | DELAS00832 | A9BS69 | Peptide deformylase |
| [B] Diaphorobacter sp. (strain TPSY) | DIAST03315 | B9MHW4 | Peptide deformylase |
| [B] Verminephrobacter eiseniae (strain EF01-2) | VEREI03963 | A1WQ80 | Peptide deformylase |
| [B] Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) | NEIG101663 | DEF_NEIG1 | Best Blastp Hit: pir||E81238 formylmethionine deformylase (EC 3.5.1.31) NMA0164 [imported] - Neisseria meningitidis (group B strain MD58, group A strain Z2491) >gi|7225325|gb|AAF40569.1| (AE002369) polypeptide deformylase [Neisseria meningitidis MC58] >gi|7378935|emb|CAB83478.1| (AL162752) polypeptide deformylase [Neisseria meningitidis] COG0242 N-formylmethionyl-tRNA deformylase; Pdf putative polypeptide deformylase |
| [B] Neisseria gonorrhoeae (strain NCCP11945) | NEIG202315 | B4RPX3 | Peptide deformylase |
| [B] Neisseria meningitidis serogroup A | NEIMA00151 | DEF_NEIMA | Polypeptide deformylase |
| [B] Neisseria meningitidis serogroup B | NEIMB00099 | DEF_NEIMB | Peptide deformylase |
| [B] Neisseria meningitidis serogroup C (strain 053442) | NEIM001919 | DEF_NEIM0 | polypeptide deformylase Code: J; COG: COG0242 |
| [B] Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) | NEIMF00085 | DEF_NEIMF | Polypeptide deformylase |
| [B] Azoarcus sp. (strain EbN1) | AZOSE01617 | Q5P4H5 | N-formylmethionyl-tRNA deformylase 1 |
| [B] Desulfococcus oleovorans (strain DSM 6200 / Hxd3) | DESOH02219 | DEF_DESOH | Peptide deformylase |
| [B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) | AERHH00239 | A0KEX0 | peptide deformylase identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079 |
| [B] Aeromonas salmonicida (strain A449) | AERS403767 | DEF_AERS4 | Polypeptide deformylase |
| [B] Dichelobacter nodosus (strain VCS1703A) | DICNV00146 | DEF_DICNV | Formylmethionine deformylase |
| [B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) | NITOC02871 | DEF_NITOC | Peptide deformylase |
| [B] Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) | CITK804551 | DEF_CITK8 | Peptide deformylase |
| [B] Enterobacter sakazakii (strain ATCC BAA-894) | ENTS800039 | DEF_ENTS8 | Putative uncharacterized protein |
| [B] Enterobacter sp. (strain 638) | ENT3803683 | DEF_ENT38 | Peptide deformylase |
| [B] Erwinia tasmaniensis (strain DSM 17950 / ET1/99) | ERWT903123 | DEF_ERWT9 | Peptide deformylase |
| [B] Escherichia coli (strain 55989 / EAEC) | ECO5503560 | DEF_ECO55 | Peptide deformylase |
| [B] Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) | ECOLC00411 | DEF_ECOLC | Peptide deformylase |
| [B] Escherichia coli (strain DH10B) | ECODH03057 | DEF_ECODH | Peptide deformylase |
| [B] Escherichia coli (strain K12) | ECOLI03157 | DEF_ECOLI | Peptide deformylase |
| [B] Escherichia coli (strain SE11) | ECOSE03544 | DEF_ECOSE | Polypeptide deformylase |
| [B] Escherichia coli (strain SMS-3-5 / SECEC) | ECOSM03408 | DEF_ECOSM | Peptide deformylase |
| [B] Escherichia coli (strain UTI89 / UPEC) | ECOUT03647 | DEF_ECOUT | peptide deformylase |
| [B] Escherichia coli O127:H6 (strain E2348/69 / EPEC) | ECO2703487 | DEF_ECO27 | Peptide deformylase |
| [B] Escherichia coli O139:H28 (strain E24377A / ETEC) | ECO2403539 | A7ZSH5 | Peptide deformylase |
| [B] Escherichia coli O157:H7 | ECO5703941 | DEF_ECO57 | Residues 1 to 169 of 169 are 100.00 pct identical to residues 1 to 169 of 169 from Escherichia coli K-12 Strain MG1655: B3287 peptide deformylase |
| [B] Escherichia coli O157:H7 (strain EC4115 / EHEC) | ECO5E03932 | DEF_ECO5E | Peptide deformylase |
| [B] Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) | ECOLU03649 | DEF_ECOLU | Peptide deformylase |
| [B] Escherichia coli O1:K1 / APEC | ECOK103261 | DEF_ECOK1 | peptide deformylase |
| [B] Escherichia coli O45:K1 (strain S88 / ExPEC) | ECO4503484 | DEF_ECO45 | Peptide deformylase |
| [B] Escherichia coli O6 | ECOL603912 | DEF_ECOL6 | Peptide deformylase |
| [B] Escherichia coli O6:K15:H31 (strain 536) | ECOL503321 | DEF_ECOL5 | peptide deformylase |
| [B] Escherichia coli O7:K1 (strain IAI39 / ExPEC) | ECO7I03580 | DEF_ECO7I | Peptide deformylase |
| [B] Escherichia coli O81 (strain ED1a) | ECO8103738 | DEF_ECO81 | Peptide deformylase |
| [B] Escherichia coli O9:H4 (strain HS) | ECOHS03225 | DEF_ECOHS | Peptide deformylase |
| [B] Proteus mirabilis (strain HI4320) | PROMH03254 | B4F1L7 | Polypeptide deformylase |
| [B] Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) | SALAR04045 | DEF_SALAR | Putative uncharacterized protein |
| [B] Salmonella agona (strain SL483) | SALA403331 | DEF_SALA4 | Peptide deformylase |
| [B] Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | SALCH03293 | DEF_SALCH | IPR000181: Formylmethionine deformylase peptide deformylase |
| [B] Salmonella dublin (strain CT_02021853) | SALDC03407 | DEF_SALDC | Peptide deformylase |
| [B] Salmonella enteritidis PT4 (strain P125109) | SALEP03206 | DEF_SALEP | Polypeptide deformylase |
| [B] Salmonella gallinarum (strain 287/91 / NCTC 13346) | SALG203877 | DEF_SALG2 | Polypeptide deformylase |
| [B] Salmonella heidelberg (strain SL476) | SALHS03443 | DEF_SALHS | Peptide deformylase |
| [B] Salmonella newport (strain SL254) | SALNS03420 | DEF_SALNS | Peptide deformylase |
| [B] Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) | SALPB04084 | DEF_SALPB | Putative uncharacterized protein |
| [B] Salmonella paratyphi A (strain AKU_12601) | SALPK03178 | DEF_SALPK | Polypeptide deformylase |
| [B] Salmonella paratyphi-a | SALPA03040 | DEF_SALPA | similar to Salmonella typhi Ty2 polypeptide deformylase polypeptide deformylase |
| [B] Salmonella schwarzengrund (strain CVM19633) | SALSV03327 | DEF_SALSV | Peptide deformylase |
| [B] Salmonella typhi | SALTI04007 | DEF_SALTI | Peptide deformylase |
| [B] Salmonella typhimurium | SALTY03263 | DEF_SALTY | similar to Escherichia coli peptide deformylase (AAC76312.1) peptide deformylase |
| [B] Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) | SHIB302818 | DEF_SHIB3 | Peptide deformylase |
| [B] Shigella boydii serotype 4 (strain Sb227) | SHIBS02691 | DEF_SHIBS | Code: J; COG: COG0242 peptide deformylase |
| [B] Shigella dysenteriae serotype 1 (strain Sd197) | SHIDS02697 | DEF_SHIDS | Code: J; COG: COG0242 peptide deformylase |
| [B] Shigella flexneri | SHIFL02996 | DEF_SHIFL | Residues 1 to 169 of 169 are 99 pct identical to residues 1 to 169 of a 169 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289848.1 peptide deformylase |
| [B] Shigella flexneri serotype 5b (strain 8401) | SHIF802832 | DEF_SHIF8 | peptide deformylase Code: J; COG: COG0242 |
| [B] Shigella sonnei (strain Ss046) | SHISS02841 | DEF_SHISS | Code: J; COG: COG0242 peptide deformylase |
| [B] Sodalis glossinidius (strain morsitans) | SODGM02212 | DEF_SODGM | polypeptide deformylase |
| [B] Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) | YERE803696 | DEF_YERE8 | Polypeptide deformylase |
| [B] Yersinia pestis | YERPE00222 | DEF_YERPE | Peptide deformylase |
| [B] Yersinia pestis (biovar Antiqua strain Antiqua) | YERPA03051 | DEF_YERPA | Polypeptide deformylase |
| [B] Yersinia pestis (biovar Antiqua strain Nepal516) | YERPN03671 | DEF_YERPN | Polypeptide deformylase |
| [B] Yersinia pestis (strain Pestoides F) | YERPP00155 | DEF_YERPP | Polypeptide deformylase |
| [B] Yersinia pestis bv. Antiqua (strain Angola) | YERPG00521 | DEF_YERPG | Peptide deformylase |
| [B] Yersinia pseudotuberculosis | YERPS03641 | DEF_YERPS | Peptide deformylase |
| [B] Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758) | YERP303805 | DEF_YERP3 | Peptide deformylase |
| [B] Yersinia pseudotuberculosis serotype IB (strain PB1/+) | YERPB03784 | DEF_YERPB | Peptide deformylase |
| [B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII) | YERPY00312 | DEF_YERPY | Peptide deformylase |
| [B] Blochmannia pennsylvanicus (strain BPEN) | BLOPB00210 | DEF_BLOPB | ortholog to Escherichia coli bnum: b3287; MultiFun: Information transfer 2.3.3 polypeptide deformylase |
| [B] Psychrobacter cryohalolentis (strain K5) | PSYCK00038 | DEF_PSYCK | Peptide deformylase |
| [B] Photobacterium profundum | PHOPR03260 | Q6LLJ3 | Putative polypeptide deformylase |
| [B] Treponema denticola | TREDE01632 | Q73M64 | identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079 polypeptide deformylase |
| [B] Thermotoga maritima | THEMA01639 | DEF_THEMA | Peptide deformylase |
| [B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) | THEP101114 | DEF_THEP1 | Peptide deformylase |
| [B] Thermotoga sp. (strain RQ2) | THESQ01150 | DEF_THESQ | Peptide deformylase |