List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
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OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 248732

go_function: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
This group has 9 members: 8 [E]ukaryota 1 [B]acteria
Fingerprint: IGTSIDS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Dictyostelium discoideumDICDI04438  UniProtKB/TrEMBL Q550P3  
[E] Trypanosoma bruceiTRYBB02923   AAX70137.1  Gene within a repeat region that may contain misassembly; go_component: membrane [goid 0016020]; go_function: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [goid 0004571]; go_function: calcium ion binding [goid 0005509]; go_process: N-linked glycosylation [goid 0006487] mannosyl-oligosaccharide 1,2-alpha-mannosidase IB, putative
[E] Ostreococcus lucimarinusOSTLU05127  UniProtKB/TrEMBL A4S423  predicted protein go_component: membrane; go_function: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; calcium ion binding; go_process: N-linked glycosylation
[E] Oryza sativaORYSA02646   BAF06315.1  Glycoside hydrolase, family 47 protein contains InterPro domain(s): IPR001382 has GO asignment(s): GO:0005509, GO:0006487, GO:0016020 supported by AK067004
[E] Sorghum bicolorSORBI32943  UniProtKB/TrEMBL C5XLL0  jgi|Sorbi1|5053799|Sb03g036080
[E] Populus trichocarpaPOPTR10266  UniProtKB/TrEMBL B9HKD6  jgi|Poptr1_1|419089|gw1.VIII.517.1 [DNA partly invalid]
[E] Arabidopsis thalianaARATH23977  UniProtKB/TrEMBL Q9FG93  glycoside hydrolase family 47 protein, similar to mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (Mus musculus)(SP|P39098); go_component: endomembrane system [goid GO:0004559@[ISS]; GO:0004571@[IEA]; GO:0005509@[IEA]; GO:0006487@[ISS]; GO:0012505@[IEA]; GO:0016020@[IEA]] [evidence IEA]; go_component: membrane [goid GO:0016020] [evidence IEA]; go_function: alpha-mannosidase activity [goid GO:0004559] [evidence ISS]; go_function: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [goid GO:0004571] [evidence IEA]; go_function: calcium ion binding [goid GO:0005509] [evidence IEA]; go_process: protein amino acid N-linked glycosylation [goid GO:0006487] [evidence IEA]; go_process: protein amino acid N-linked glycosylation [goid GO:0006487] [evidence ISS] alpha-mannosidase/ calcium ion binding / mannosyl-oligosaccharide 1,2-alpha-mannosidase
[E] Vitis viniferaVITVI02067  UniProtKB/TrEMBL A7NWZ5  
[B] Saccharopolyspora erythraea (strain NRRL 23338)SACEN05993  UniProtKB/TrEMBL A4FMX3  Hypothetical protein