List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 327271

type II DNA modification
This group has 8 members: 2 [A]rchaea 6 [B]acteria
Fingerprint: IDYHEQH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Cenarchaeum symbiosumCENSY00804  UniProtKB/TrEMBL A0RVU1  DNA modification methylase
[A] Methanocaldococcus jannaschiiMETJA01487  UniProtKB/Swiss-Prot MTM2_METJA  Modification methylase MjaII
[B] Sulfurihydrogenibium sp. (strain YO3AOP1)SULSY01661  UniProtKB/TrEMBL B2V791  DNA methylase N-4/N-6 domain protein
[B] Chlorobium chlorochromatii (strain CaD3)CHLCH00324  UniProtKB/TrEMBL Q3ATS0  type II DNA modification methyltransferase M.TdeIII
[B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78)CHLT301145  UniProtKB/TrEMBL B3QYI9  DNA methylase N-4/N-6 domain protein
[B] Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)PELTS01114  UniProtKB/TrEMBL A5D365  Putative uncharacterized protein
[B] Treponema denticolaTREDE00902  UniProtKB/TrEMBL Q73P90  identified by similarity to SP:Q58843 type II DNA modification methyltransferase M.TdeIII
[B] Uncultured termite group 1 bacterium phylotype Rs-D17UNCTG00041  UniProtKB/TrEMBL B1GZ42  Type II DNA modification methylase