List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 7240

thiamine-monophosphate kinase
This group has 8 members: 1 [A]rchaea 7 [B]acteria
Fingerprint: AMLDISD

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)METLZ00434  UniProtKB/TrEMBL A2SQK6  Succinate dehydrogenase
[B] Arthrobacter aurescens (strain TC1)ARTAT02364  UniProtKB/TrEMBL A1R7J3  Thiamine-monophosphate kinase
[B] Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589)RENSM01702  UniProtKB/TrEMBL A9WMZ9  Thiamine-monophosphate kinase
[B] Saccharopolyspora erythraea (strain NRRL 23338)SACEN05895  UniProtKB/TrEMBL A4FMM5  Putative thiamine monophosphate kinase
[B] Methylibium petroleiphilum (strain PM1)METPP01562  UniProtKB/TrEMBL A2SG70  Thiamine-phosphate kinase
[B] Desulfovibrio desulfuricans (strain G20)DESDG03507  UniProtKB/TrEMBL Q30VD3  thiamine-monophosphate kinase
[B] Sorangium cellulosum (strain So ce56)SORC500385  UniProtKB/TrEMBL A9GR51  Thiamine-phosphate kinase
[B] Psychrobacter sp. (strain PRwf-1)PSYWF02216  UniProtKB/TrEMBL A5WHT2  Thiamine-monophosphate kinase