List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 191455

3-dehydroquinate dehydratase
This group has 14 members: 12 [A]rchaea 2 [B]acteria
Fingerprint: IAKLAVM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Nitrosopumilus maritimus (strain SCM1)NITMS00547  UniProtKB/TrEMBL A9A234  3-dehydroquinate dehydratase, type I
[A] Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)PYRIL01752  UniProtKB/TrEMBL A1RVF6  3-dehydroquinate dehydratase, type I
[A] Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta)THENV00788  UniProtKB/TrEMBL B1YD84  3-dehydroquinate dehydratase, type I
[A] Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861)METS300229  UniProtKB/Swiss-Prot AROD_METS3  3-dehydroquinate dehydratase
[A] Methanosphaera stadtmanae (strain DSM 3091)METST00551  UniProtKB/Swiss-Prot AROD_METST  AroD 3-dehydroquinate dehydratase
[A] Methanobacterium thermoautotrophicumMETTH00562  UniProtKB/Swiss-Prot AROD_METTH  3-dehydroquinate dehydratase
[A] Methanocaldococcus jannaschiiMETJA01493  UniProtKB/Swiss-Prot AROD_METJA  3-dehydroquinate dehydratase
[A] Methanococcoides burtonii (strain DSM 6242)METBU01829  UniProtKB/Swiss-Prot AROD_METBU  3-dehydroquinate dehydratase, type I
[A] Methanosarcina acetivoransMETAC04401  UniProtKB/Swiss-Prot AROD_METAC  3-dehydroquinate dehydratase
[A] Methanosarcina barkeri (strain Fusaro / DSM 804)METBF00892  UniProtKB/Swiss-Prot AROD_METBF  3-dehydroquinate dehydratase
[A] Methanosarcina mazeiMETMA01252  UniProtKB/Swiss-Prot AROD_METMA  3-dehydroquinate dehydratase
[A] Methanopyrus kandleriMETKA00429  UniProtKB/Swiss-Prot AROD_METKA  3-dehydroquinate dehydratase
[B] Aquifex aeolicusAQUAE00014  UniProtKB/Swiss-Prot AROD_AQUAE  3-dehydroquinate dehydratase
[B] Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)RHOFD02320  UniProtKB/Swiss-Prot AROD_RHOFD  3-dehydroquinate dehydratase, type I