List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 332741

beta galactosidase
This group has 6 members: 3 [E]ukaryota 3 [B]acteria
Fingerprint: HYWRIPV

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Phaeosphaeria nodorumPHANO05745  UniProtKB/TrEMBL Q0UK59  hypothetical protein
[E] Aspergillus fumigatusASPFU01546  UniProtKB/TrEMBL Q4WRD3  beta galactosidase, putative
[E] Botrytis cinereaBOTFB06325  UniProtKB/TrEMBL A6RPN7  Botrytis cinerea hypothetical protein
[B] Phytoplasma sp. (strain STRAWB1)STRAW05753  UniProtKB/TrEMBL Q82BE9  Putative beta-galactosidase
[B] Streptomyces coelicolorSTRCO02411  UniProtKB/TrEMBL Q8CJI7  SCC24.01, possible sugar hydrolase (fragment) (putative secreted protein), len: >407 aa; similar to C-terminal region of SW:BGAL_ASPNG (EMBL:L06037) Aspergillus niger beta galactosidase precursor (EC 3.2.1.23) LacA, 1006 aa; fasta scores: opt: 214 z-score: 223.7 E(): 5e-05; 27.1% identity in 321 aa overlap SCC42.11, probable secreted beta-galactosidase (fragment), len: >555 aa; similar to SW:BGAL_ASPNG (EMBL:L06037) Aspergillus niger beta-galactosidase precursor (EC 3.2.1.23) LacA, 1006 aa; fasta scores: opt: 413 z-score: 403.4 E(): 5.4e-15; 24.3% identity in 608 aa overlap. Contains possible N-terminal region signal peptide sequence putative secreted beta-galactosidase
[B] Zymomonas mobilisZYMMO00898  UniProtKB/TrEMBL C5TG34  COG1874 beta-galactosidase