List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 61929

alpha subunit
This group has 15 members: 15 [B]acteria
Fingerprint: HSTAGDD

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Geobacillus thermodenitrificans (strain NG80-2)GEOTN00901  UniProtKB/TrEMBL A4ILU6  Pyruvate dehydrogenase (Lipoamide)alpha subunit
[B] Staphylococcus aureus (strain MRSA252)STAAR01031  UniProtKB/Swiss-Prot ODPA_STAAR  Similar to Bacillus stearothermophilus pyruvate dehydrogenase E1 component, alpha subunit PdhA SW:ODPA_BACST (P21873) (368 aa) fasta scores: E(): 2.6e-102, 74.931% id in 363 aa, and to Bacillus subtilis pyruvate dehydrogenase E1 component, alpha subunit PdhA SW:ODPA_BACSU (P21881) (370 aa) fasta scores: E(): 2.2e-103, 75.342% id in 365 aa putative pyruvate dehydrogenase E1 component, alpha subunit
[B] Staphylococcus aureus (strain bovine RF122)STAAB00953  UniProtKB/TrEMBL Q2YX80  pyruvate dehydrogenase E1 component alpha subunit
[B] Lactobacillus sakei subsp. sakei (strain 23K)LACSS01071  UniProtKB/TrEMBL Q38WP5  Pyruvate dehydrogenase complex, E1 component, alpha subunit
[B] Lactobacillus salivarius subsp. salivarius (strain UCC118)LACS100145  UniProtKB/TrEMBL Q1WVE9  Pyruvate dehydrogenase E1 component alpha subunit COG1071 [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
[B] Leuconostoc citreum (strain KM20)LEUCK00420  UniProtKB/TrEMBL B1MXK5  Pyruvate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
[B] Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523)LEUMM00675  UniProtKB/TrEMBL Q03Y75  acetoin dehydrogenase complex, E1 component, alpha subunit
[B] Oenococcus oeni (strain BAA-331 / PSU-1)OENOB00296  UniProtKB/TrEMBL Q04GW9  acetoin dehydrogenase complex, E1 component, alpha subunit
[B] Lactococcus lactis subsp. cremoris (strain MG1363)LACLM00068  UniProtKB/TrEMBL A2RHE4  Pyruvate dehydrogenase E1 component alpha subunit
[B] Lactococcus lactis subsp. cremoris (strain SK11)LACLS00041  UniProtKB/TrEMBL Q033E3  acetoin dehydrogenase complex, E1 component, alpha subunit
[B] Lactococcus lactis subsp. lactisLACLA00058  UniProtKB/TrEMBL Q9CJD5  PDH E1 component alpha subunit
[B] Photobacterium profundumPHOPR04321  UniProtKB/TrEMBL Q6LIB4  putative pyruvate dehydrogenase E1 component, alpha subunit
[B] Stenotrophomonas maltophilia (strain K279a)STRMK04075  UniProtKB/TrEMBL B2FKN8  Putative pyruvate dehydrogenase E1 component,alpha subunit
[B] Xanthomonas axonopodis (pv. citri)XANAC00439  UniProtKB/TrEMBL Q8PQ82  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark pyruvate dehydrogenase E1 alpha subunit
[B] Xanthomonas campestris pv. vesicatoria (strain 85-10)XANC500465  UniProtKB/TrEMBL Q3BYF6  putative pyruvate dehydrogenase E1 alpha subunit