List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 185038

family 43
This group has 6 members: 6 [B]acteria
Fingerprint: HSRIEGP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus amyloliquefaciens (strain FZB42)BACA203518  UniProtKB/TrEMBL A7ZAE2  YxiA
[B] Bacillus subtilisBACSU03931   CAB15969.1  Hypothetical protein yxiA precursor
[B] Clostridium acetobutylicumCLOAB00568  UniProtKB/TrEMBL Q97LI4  Endo-arabinase related enzyme (family 43 glycosyl hydrolase domain and ricin B-like domain)
[B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH00015  UniProtKB/TrEMBL A3DBC8  Alpha-L-arabinofuranosidase B precursor
[B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP100629  UniProtKB/TrEMBL A5IKD6  Glycoside hydrolase, family 43 precursor
[B] Thermotoga sp. (strain RQ2)THESQ00655  UniProtKB/TrEMBL Q7WU65  Putative uncharacterized protein