List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 229298

amidohydrolase
This group has 5 members: 3 [A]rchaea 2 [B]acteria
Fingerprint: HKEDDIA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)IGNH400397  UniProtKB/TrEMBL A8A9H9  Amidohydrolase
[A] Pyrococcus horikoshiiPYRHO00012  UniProtKB/TrEMBL O57772  Putative uncharacterized protein PH0008
[A] Thermococcus onnurineus (strain NA1)THEON00709  UniProtKB/TrEMBL B6YVB4  Hypothetical Imidazolonepropionase-like amidohydrolase
[B] Bacillus clausii (strain KSM-K16)BACSK00559  UniProtKB/TrEMBL Q5WKK3  conserved hypothetical protein
[B] Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)CARHZ00698  UniProtKB/TrEMBL Q3AE62  identified by match to protein family HMM PF01979 amidohydrolase family protein