List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 221798

Glycoside hydrolase family 3 domain protein
This group has 4 members: 4 [B]acteria
Fingerprint: HHGLAPV

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Roseiflexus castenholzii (strain DSM 13941 / HLO8)ROSCS00875  UniProtKB/TrEMBL A7NHR9  glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein KEGG: csc:Csac_0586 glycoside hydrolase, family 3 domain protein
[B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD00792  UniProtKB/TrEMBL B8E050  Glycoside hydrolase family 3 domain protein
[B] Marinomonas sp. (strain MWYL1)MARMS02713  UniProtKB/TrEMBL A6VYZ5  Glycoside hydrolase family 3 domain protein
[B] Petrotoga mobilis (strain DSM 10674 / SJ95)PETMO00225  UniProtKB/TrEMBL A9BJ29  Glycoside hydrolase family 3 domain protein