List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 130956

group 1
This group has 4 members: 4 [A]rchaea
Fingerprint: HERIVHY

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Methanoregula boonei (strain 6A8)METB601517  UniProtKB/TrEMBL A7I8I0  Glycosyl transferase, group 1
[A] Methanosaeta thermophila (strain DSM 6194 / PT)METTP01496  UniProtKB/TrEMBL A0B9E8  glycosyl transferase, group 1 PFAM: glycosyl transferase, group 1 KEGG: mta:Moth_1934 glycosyl transferase, group 1
[A] Thermoplasma volcaniumTHEVO00430  UniProtKB/TrEMBL Q97BM5  RfbU related protein
[A] Uncultured methanogenic archaeon RC-IUNCMA01594  UniProtKB/TrEMBL Q0W4S7  putative glycosyltransferase (group 1)