List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 41011

Putative O-linked N-acetylglucosamine transferase
This group has 6 members: 1 [E]ukaryota 5 [B]acteria
Fingerprint: HEDAITK

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Populus trichocarpaPOPTR10068  UniProtKB/TrEMBL B9HBX3  jgi|Poptr1_1|417452|gw1.VI.1825.1 [DNA partly invalid]
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB03290  UniProtKB/TrEMBL A5EHI2  Putative O-linked N-acetylglucosamine transferase, SPINDLY family
[B] Bradyrhizobium sp. (strain ORS278)BRASO04404  UniProtKB/TrEMBL A4YWW4  Putative O-linked N-acetylglucosamine transferase, SPINDLY family; TPR domain protein
[B] Rhodopseudomonas palustris (strain BisA53)RHOP502476  UniProtKB/TrEMBL Q07NM8  Tetratricopeptide TPR_2 repeat protein PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: bja:blr5623 TPR domain protein
[B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT02844  UniProtKB/TrEMBL Q2RQE3  conserved hypothetical protein
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP802968  UniProtKB/TrEMBL B2JJ65  TPR repeat-containing protein