List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 62052

response regulator
This group has 8 members: 8 [B]acteria
Fingerprint: GYEICTQ

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Cyanothece (strain ATCC 51142)CYAA504131  UniProtKB/TrEMBL B1WRV3  Two-component response regulator
[B] Cyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP401180  UniProtKB/TrEMBL B8HNR3  Response regulator receiver protein
[B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP202490  UniProtKB/TrEMBL B1XKN6  Chemotaxis protein CheY
[B] Synechocystis sp. (strain PCC 6803)SYNY302788  UniProtKB/TrEMBL Q55448  PatA subfamily
[B] Anabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT03701  UniProtKB/TrEMBL Q3M6K6  Response regulator receiver domain protein (CheY)
[B] Anabaena sp. (strain PCC 7120)ANASP01060  UniProtKB/TrEMBL Q8YXY4  Two-component response regulator
[B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102)NOSP705411  UniProtKB/TrEMBL B2IU17  Response regulator receiver protein
[B] Trichodesmium erythraeum (strain IMS101)TRIEI00503  UniProtKB/TrEMBL Q118M2  Response regulator receiver protein