List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
groups that are linked by at least one pair
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Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
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OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
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OMA

Keyword Protein Sequence Group Entry

OMA Group 234870

Chorismate lyase
This group has 38 members: 38 [B]acteria
Fingerprint: GTPYVAA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bordetella bronchisepticaBORBR02510  UniProtKB/Swiss-Prot UBIC_BORBR  ortholog of Bordetella pertussis (BX470248) BP0981 conserved hypothetical protein
[B] Bordetella parapertussisBORPA01440  UniProtKB/Swiss-Prot UBIC_BORPA  ortholog of Bordetella pertussis (BX470248) BP0981 conserved hypothetical protein
[B] Bordetella pertussisBORPE00894  UniProtKB/Swiss-Prot UBIC_BORPE  Similar to Pseudomonas aeruginosa hypothetical protein Pa5357 TR:Q9HTK1 (EMBL:AE004947) (178 aa) fasta scores: E(): 3.5, 35.519% id in 183 aa, and to Pseudomonas putida hypothetical 20.6 kDa protein TR:Q9FD32 (EMBL:AF292094) (182 aa) fasta scores: E(): 2.3, 34.884% id in 172 aa conserved hypothetical protein
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD02966  UniProtKB/TrEMBL A9IT23  Putative chorismate--pyruvate lyase
[B] Burkholderia ambifaria (strain MC40-6)BURA402233  UniProtKB/TrEMBL B1YUA1  Chorismate lyase
[B] Burkholderia cenocepacia (strain AU 1054)BURCA01714  UniProtKB/Swiss-Prot UBIC_BURCA  Probable chorismate--pyruvate lyase
[B] Burkholderia cenocepacia (strain HI2424)BURCH02331  UniProtKB/Swiss-Prot UBIC_BURCH  Chorismate lyase PFAM: Chorismate lyase KEGG: bcn:Bcen_1734 chorismate lyase
[B] Burkholderia cenocepacia (strain MC0-3)BURCC02341  UniProtKB/TrEMBL B1JW91  Chorismate lyase
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM02371  UniProtKB/Swiss-Prot UBIC_BURCM  Chorismate lyase PFAM: Chorismate lyase KEGG: bur:Bcep18194_A5685 chorismate lyase
[B] Burkholderia cepacia (strain J2315 / LMG 16656)BURCJ02334  UniProtKB/TrEMBL B4E6G7  chorismate lyase
[B] Burkholderia multivorans (strain ATCC 17616 / 249)BURM102498  UniProtKB/TrEMBL A9AII9  Chorismate lyase
[B] Burkholderia sp. (strain 383)BURS302492  UniProtKB/Swiss-Prot UBIC_BURS3  Chorismate lyase
[B] Burkholderia vietnamiensis (strain G4 / LMG 22486)BURVG02348  UniProtKB/TrEMBL A4JGM9  Chorismate lyase
[B] Burkholderia malleiBURMA01592  UniProtKB/Swiss-Prot UBIC_BURMA  Probable chorismate--pyruvate lyase
[B] Burkholderia mallei (strain NCTC 10229)BURM900811  UniProtKB/TrEMBL A2S4H9  Chorismate lyase family protein
[B] Burkholderia mallei (strain NCTC 10247)BURM700262  UniProtKB/TrEMBL A3MHX9  Chorismate lyase family protein
[B] Burkholderia mallei (strain SAVP1)BURMS00942  UniProtKB/TrEMBL A1V293  Chorismate lyase family protein
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP802091  UniProtKB/TrEMBL B2JE81  Chorismate lyase
[B] Burkholderia phytofirmans (strain DSM 17436 / PsJN)BURPP01164  UniProtKB/TrEMBL B2T225  Chorismate lyase
[B] Burkholderia pseudomalleiBURPS01090  UniProtKB/Swiss-Prot UBIC_BURPS  Similar to Ralstonia solanacearum hypothetical protein rsc2780 or rs00067 SWALL:Q8XVQ0 (EMBL:AL646071) (176 aa) fasta scores: E(): 2.8e-10, 37.58% id in 157 aa, and to Pseudomonas aeruginosa hypothetical protein pa5357 SWALL:Q9HTK1 (EMBL:AE004947) (178 aa) fasta scores: E(): 3e-05, 34.8% id in 181 aa conserved hypothetical protein
[B] Burkholderia pseudomallei (strain 1106a)BURP001155  UniProtKB/TrEMBL A3NSX6  Chorismate--pyruvate lyase
[B] Burkholderia pseudomallei (strain 1710b)BURP101294   ABA47638.1  chorismate lyase family protein identified by match to protein family HMM PF04345
[B] Burkholderia pseudomallei (strain 668)BURP601152  UniProtKB/TrEMBL A3N787  Chorismate--pyruvate lyase
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA00939   ABC39316.1  chorismate lyase family protein identified by match to protein family HMM PF04345
[B] Burkholderia xenovorans (strain LB400)BURXL01098  UniProtKB/Swiss-Prot UBIC_BURXL  Probable chorismate--pyruvate lyase
[B] Cupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR02577  UniProtKB/TrEMBL B3R6T5  Putative chorismate pyruvate lyase
[B] Ralstonia eutropha (strain JMP134)RALEJ02829  UniProtKB/Swiss-Prot UBIC_RALEJ  Chorismate lyase
[B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME02987   ABF09930.1  Chorismate lyase
[B] Ralstonia pickettii (strain 12J)RALPJ02916  UniProtKB/TrEMBL B2UCE2  Chorismate lyase
[B] Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)RHOFD02948  UniProtKB/Swiss-Prot UBIC_RHOFD  Chorismate lyase
[B] Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis)JANMA02964  UniProtKB/TrEMBL A6T2A8  Chorismate--pyruvate lyase
[B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875)METFK00053  UniProtKB/Swiss-Prot UBIC_METFK  Chorismate lyase
[B] Azoarcus sp. (strain BH72)AZOSB00474  UniProtKB/Swiss-Prot UBIC_AZOSB  putative chorismate:pyruvate lyase Chorismate:pyruvate lyase (EC 4.-.-.-). catalytic activity: chorismate = 4-hydroxybenzoate + pyruvate. pathway: ubiquinone biosynthesis; first step. Specificity unclear
[B] Dechloromonas aromatica (strain RCB)DECAR03201  UniProtKB/Swiss-Prot UBIC_DECAR  Chorismate lyase
[B] Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8)MARAV03456  UniProtKB/Swiss-Prot UBIC_MARAV  Chorismate lyase PFAM: Chorismate lyase KEGG: pau:PA14_70720 chorismate-pyruvate lyase
[B] Halorhodospira halophila (strain DSM 244 / SL1)HALHL00945   ABM61742.1  Chorismate lyase
[B] Cellvibrio japonicus (strain Ueda107)CELJU00149  UniProtKB/TrEMBL B3PG97  Chorismate--pyruvate lyase
[B] Pseudomonas entomophila (strain L48)PSEE404406  UniProtKB/Swiss-Prot UBIC1_PSEE4  putative chorismate lyase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme