List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 257485

Polysaccharide biosynthesis protein
This group has 7 members: 7 [B]acteria
Fingerprint: GSWKSSS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides fragilisBACFR03633  UniProtKB/TrEMBL Q64Q36  similar to gp:AF142639_20 [Lactococcus lactis subsp. cremoris], percent identity 45 in 234 aa, BLASTP E(): 2e-52 putative glycosyltransferase
[B] Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)PARD801240  UniProtKB/TrEMBL A6LBI2  Glycosyltransferase family 32
[B] Clostridium botulinum (strain Alaska E43 / type E3)CLOBA03101  UniProtKB/TrEMBL B2V0U0  Eps7I
[B] Clostridium difficile (strain 630)CLOD602809  UniProtKB/TrEMBL Q183L1  putative polysaccharide biosynthesis protein
[B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365)LACDB01518  UniProtKB/TrEMBL Q047W6  Mannosyltransferase OCH1 related enzyme
[B] Streptococcus agalactiae (serotype V)STRA501132  UniProtKB/TrEMBL Q8DZD7  similar to GP:13549133; identified by sequence similarity; putative polysaccharide biosynthesis protein CpsM(V)
[B] Fusobacterium nucleatum subsp. nucleatumFUSNN01798  UniProtKB/TrEMBL Q8R5W3  Polysaccharide biosynthesis protein