List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 215611

identified by match to
This group has 12 members: 12 [B]acteria
Fingerprint: GMELIAN

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ101996  UniProtKB/TrEMBL A5FID4  Transaldolase
[B] Listeria innocuaLISIN00361  UniProtKB/Swiss-Prot TAL2_LISIN  similar to transaldolase
[B] Listeria monocytogenesLISMO00341  UniProtKB/Swiss-Prot TAL2_LISMO  similar to transaldolase
[B] Listeria monocytogenes (serotype 4b / strain F2365)LISMF00359  UniProtKB/Swiss-Prot TAL2_LISMF  identified by match to protein family HMM PF00923; match to protein family HMM TIGR00875 transaldolase, putative
[B] Listeria monocytogenes serotype 4a (strain HCC23)LISMH02259  UniProtKB/TrEMBL B8DEQ7  Transaldolase, putative
[B] Listeria monocytogenes serotype 4b (strain Clip81459)LISMC00339  UniProtKB/TrEMBL C1KZ58  Putative transaldolase
[B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)LISW600299  UniProtKB/TrEMBL A0AFD5  Complete genome
[B] Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)HALOH00314  UniProtKB/TrEMBL B8D1L2  Putative transaldolase
[B] Streptococcus agalactiae (serotype III)STRA301751  UniProtKB/Swiss-Prot TAL_STRA3  similar to hypothetical transaldolase unknown
[B] Streptococcus agalactiae (serotype V)STRA501745  UniProtKB/Swiss-Prot TAL_STRA5  identified by match to PFAM protein family HMM PF00923 transaldolase family protein
[B] Streptococcus agalactiae serotype IaSTRA101683  UniProtKB/TrEMBL Q3JZ77  identified by match to protein family HMM PF00923; match to protein family HMM TIGR00875 transaldolase, putative
[B] Maricaulis maris (strain MCS10)MARMM01144  UniProtKB/Swiss-Prot TAL_MARMM  Putative transaldolase