List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 110896

group 1
This group has 5 members: 4 [A]rchaea 1 [B]acteria
Fingerprint: GIHPYAP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Methanoregula boonei (strain 6A8)METB601531  UniProtKB/TrEMBL A7I8J4  Glycosyl transferase, group 1
[A] Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)METMJ01248  UniProtKB/TrEMBL A3CUZ6  Glycosyl transferase, group 1
[A] Methanospirillum hungatei (strain JF-1 / DSM 864)METHJ01685  UniProtKB/TrEMBL Q2FM52  glycosyl transferase, group 1
[A] Uncultured methanogenic archaeon RC-IUNCMA01597  UniProtKB/TrEMBL Q0W4T0  putative glycosyltransferase (group 1)
[B] Myxococcus xanthus (strain DK 1622)MYXXD03473  UniProtKB/TrEMBL Q1D6A7  glycosyl transferase, group 1 identified by match to protein family HMM PF00534