List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 67977

Glycoside hydrolase family 5
This group has 8 members: 8 [B]acteria
Fingerprint: KYGIHIC

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)HERA200881  UniProtKB/TrEMBL A9AYF4  Glycoside hydrolase family 5
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT600502  UniProtKB/TrEMBL B5YCY1  Endoglucanase
[B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD00615  UniProtKB/TrEMBL B8DZM3  Glycoside hydrolase family 5
[B] Anaerocellum thermophilum (strain DSM 6725 / Z-1320)ANATD00215  UniProtKB/TrEMBL B9MMF2  Glycoside hydrolase family 5
[B] Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)CALS800117  UniProtKB/TrEMBL A4XFV4  Glycoside hydrolase, family 5
[B] Thermotoga maritimaTHEMA01728  UniProtKB/TrEMBL Q9X274  Endoglucanase
[B] Thermotoga sp. (strain RQ2)THESQ01057  UniProtKB/TrEMBL B1LAS1  Glycoside hydrolase family 5
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP00983  UniProtKB/TrEMBL B1ZXQ3  Glycoside hydrolase family 5 precursor