List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 262101

hydrolase family 12
This group has 6 members: 6 [B]acteria
Fingerprint: GGIKSYP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Phytoplasma sp. (strain STRAWB1)STRAW02570  UniProtKB/TrEMBL Q82K33  Putative sugar hydrolase, secreted
[B] Streptomyces coelicolorSTRCO05656  UniProtKB/TrEMBL Q9KYS4  SC5H4.15, probable secreted sugar hydrolase, len: 244 aa; similar to SW:GUNS_ERWCA (EMBL:M32399) Erwinia carotovora endoglucanase S precursor (EC 3.2.1.4) (endo-1,4-beta-glucanase S) (cellulase S) CelS, 264 aa; fasta scores: opt: 283 z-score: 330.2 E(): 6.2e-11; 33.2% identity in 253 aa overlap. Contains Pfam match to entry PF01670 Glyco_hydro_12, Glycosyl hydrolase family 12 and possible N-terminal region signal peptide sequence putative secreted sugar hydrolase
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH01615  UniProtKB/TrEMBL A9KRD8  Glycoside hydrolase family 12 precursor
[B] Bradyrhizobium japonicumBRAJA01925  UniProtKB/TrEMBL Q9AN41  Blr1964 protein
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP807424  UniProtKB/TrEMBL B2JYE8  Putative uncharacterized protein precursor
[B] Cupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR05591  UniProtKB/TrEMBL B2AK99  Putative glycosyl hydrolase; putative exported protein