List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 242167
hypothetical protein
This group has 14 members: 14 [E]ukaryota
Fingerprint: GAFVDHN
| [E] Xenopus tropicalis | XENTR03308 | RG9D2_XENTR | Rg9mtd2-prov protein. |
| [E] Oryzias latipes | ORYLA06983 | ENSORLP00000015110 | - |
| [E] Caenorhabditis brenneri | CAEBI09486 | WBGene00148712 | |
| [E] Plasmodium falciparum | PLAF704172 | Q8IIH6 | hypothetical protein, conserved |
| [E] Dictyostelium discoideum | DICDI02998 | Q556G7 | |
| [E] Leishmania major | LEIMA03021 | Q4Q6Y3 | , predicted protein, len = 388 aa, unknown protein; predicted pI = 7.8116; hypothetical protein, conserved |
| [E] Leishmania braziliensis | LEIBR03119 | A4HIP1 | hypothetical protein, conserved |
| [E] Leishmania infantum | LEIIN02811 | A4I5Y8 | hypothetical protein, conserved previous systematic id LinJ30.3130 |
| [E] Trypanosoma brucei | TRYBB05578 | AAX79269.1 | hypothetical protein, conserved |
| [E] Phaeosphaeria nodorum | PHANO12849 | Q0TXI7 | hypothetical protein |
| [E] Yarrowia lipolytica | YARLI02010 | TRM10_YARLI | some similarities with tr|Q12400 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOL093W, hypothetical start |
| [E] Debaryomyces hansenii | DEBHA01119 | CAG85460.2 | DEHA2B11572p;similar to uniprot|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase; |
| [E] Populus trichocarpa | POPTR13826 | B9HC28 | jgi|Poptr1_1|560099|eugene3.00060058 [DNA did not match protein] [DNA partly invalid] |
| [E] Arabidopsis thaliana | ARATH24409 | Q9FGI9 | expressed protein, contains Pfam profile PF04243: Protein of unknown function (DUF425); go_component: cellular component unknown [goid GO:0003674@[ND]; GO:0005575@[ND]; GO:0008150@[ND]; GO:0008372@[NR]] [evidence ND]; go_function: molecular function unknown [goid GO:0005554] [evidence ND]; go_process: biological process unknown [goid GO:0000004] [evidence ND] unknown protein |