List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 242167

hypothetical protein
This group has 14 members: 14 [E]ukaryota
Fingerprint: GAFVDHN

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Xenopus tropicalisXENTR03308  UniProtKB/Swiss-Prot RG9D2_XENTR  Rg9mtd2-prov protein.
[E] Oryzias latipesORYLA06983  Ensembl ENSORLP00000015110   -
[E] Caenorhabditis brenneriCAEBI09486   WBGene00148712  
[E] Plasmodium falciparumPLAF704172  UniProtKB/TrEMBL Q8IIH6  hypothetical protein, conserved
[E] Dictyostelium discoideumDICDI02998  UniProtKB/TrEMBL Q556G7  
[E] Leishmania majorLEIMA03021  UniProtKB/TrEMBL Q4Q6Y3  , predicted protein, len = 388 aa, unknown protein; predicted pI = 7.8116; hypothetical protein, conserved
[E] Leishmania braziliensisLEIBR03119  UniProtKB/TrEMBL A4HIP1  hypothetical protein, conserved
[E] Leishmania infantumLEIIN02811  UniProtKB/TrEMBL A4I5Y8  hypothetical protein, conserved previous systematic id LinJ30.3130
[E] Trypanosoma bruceiTRYBB05578   AAX79269.1  hypothetical protein, conserved
[E] Phaeosphaeria nodorumPHANO12849  UniProtKB/TrEMBL Q0TXI7  hypothetical protein
[E] Yarrowia lipolyticaYARLI02010  UniProtKB/Swiss-Prot TRM10_YARLI  some similarities with tr|Q12400 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOL093W, hypothetical start
[E] Debaryomyces hanseniiDEBHA01119   CAG85460.2  DEHA2B11572p;similar to uniprot|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase;
[E] Populus trichocarpaPOPTR13826  UniProtKB/TrEMBL B9HC28  jgi|Poptr1_1|560099|eugene3.00060058 [DNA did not match protein] [DNA partly invalid]
[E] Arabidopsis thalianaARATH24409  UniProtKB/TrEMBL Q9FGI9  expressed protein, contains Pfam profile PF04243: Protein of unknown function (DUF425); go_component: cellular component unknown [goid GO:0003674@[ND]; GO:0005575@[ND]; GO:0008150@[ND]; GO:0008372@[NR]] [evidence ND]; go_function: molecular function unknown [goid GO:0005554] [evidence ND]; go_process: biological process unknown [goid GO:0000004] [evidence ND] unknown protein