List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 50483
Glycosyl transferase group 1
This group has 8 members: 5 [A]rchaea 3 [B]acteria
Fingerprint: GRATHQK
| [A] Methanocaldococcus jannaschii | METJA01651 | GLGA_METJA | Probable glycogen synthase |
| [A] Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) | META300007 | A6USX8 | Glycosyl transferase group 1 |
| [A] Methanococcus maripaludis | METMP01294 | Q6LXQ5 | Glycosyl transferase, group 1 |
| [A] Methanococcus maripaludis (strain C5 / ATCC BAA-1333) | METM500297 | A4FWP0 | Starch synthase |
| [A] Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) | METVS00592 | A6UPT8 | Glycosyl transferase group 1 |
| [B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237) | CLOTH00272 | A3DC42 | Glycogen/starch synthases, ADP-glucose type |
| [B] Streptococcus mutans | STRMU01382 | GLGA_STRMU | Best Blastp Hit: sp|P39125|GLGA_BACSU GLYCOGEN SYNTHASE (STARCH [BACTERIAL GLYCOGEN] SYNTHASE) >gi|480287|pir||S36627 glycogen (starch) synthase (EC 2.4.1.21) - Bacillus subtilis >gi|1084219|pir||S40051 ADPglucose--starch(bacterial glycogen) glucosyltransferase (EC 2.4.1.21) glgA - Bacillus subtilis >gi|580887|emb|CAA81043.1| (Z25795) starch (bacterial glycogen) synthase [Bacillus subtilis] >gi|2293139|gb|AAC00217.1| (AF008220) starch synthase [Bacillus subtilis] >gi|2635579|emb|CAB15073.1| (Z99119) starch (bacterial glycogen) synthase [Bacillus subtilis] putative starch (bacterial glycogen) synthase |
| [B] Alteromonas macleodii (strain DSM 17117 / Deep ecotype) | ALTMD00275 | B4S2L2 | Glycogen synthase |