List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 231918

Licheninase precursor
This group has 9 members: 9 [B]acteria
Fingerprint: DIAYSLL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ101017  UniProtKB/TrEMBL A5FL64  Licheninase
[B] Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)HERA202409  UniProtKB/TrEMBL A9AYU3  Licheninase precursor
[B] Bacillus anthracisBACAN02454  UniProtKB/TrEMBL B0AJS0  similar to GP:11862937; identified by sequence similarity; putative chitosanase
[B] Bacillus cereus (strain ATCC 14579 / DSM 31)BACCR02518  UniProtKB/TrEMBL Q81CR5  Chitosanase
[B] Bacillus cereus (strain G9842)BACC202543  UniProtKB/TrEMBL B7IIJ4  Chitosanase
[B] Bacillus cereus (strain ZK)BACCZ02391  UniProtKB/TrEMBL Q63AQ7  chitosanase; glycosyl hydrolases family 8; endoglucanase
[B] Hahella chejuensis (strain KCTC 2396)HAHCH06417  UniProtKB/TrEMBL Q2S7F9  Endoglucanase Y COG3405
[B] Marinomonas sp. (strain MWYL1)MARMS03648  UniProtKB/TrEMBL A6W1N6  Licheninase precursor
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP02246  UniProtKB/TrEMBL B1ZPU3  Glycoside hydrolase family 8