List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 262701

Endo-1,4-beta-xylanase
This group has 22 members: 2 [E]ukaryota 20 [B]acteria
Fingerprint: HFNSLTP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Phaeosphaeria nodorumPHANO02340  UniProtKB/TrEMBL Q0TXB3  hypothetical protein
[E] Ustilago maydisUSTMA03405  UniProtKB/TrEMBL Q4P902  ustilago_maydis hypothetical protein
[B] Solibacter usitatus (strain Ellin6076)SOLUE02629  UniProtKB/TrEMBL Q024A6  Endo-1,4-beta-xylanase PFAM: glycoside hydrolase, family 10 KEGG: sde:Sde_2633 endo-1,4-beta-xylanase
[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV800039  UniProtKB/TrEMBL A6KWG5  Glycoside hydrolase family 10, candidate beta- xylanase
[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ101990  UniProtKB/TrEMBL A5FIE5  Endo-1,4-beta-xylanase
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT601467  UniProtKB/TrEMBL B5YA84  Glycosyl hydrolase family 10
[B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD01578  UniProtKB/TrEMBL B8E346  Endo-1,4-beta-xylanase
[B] Anaerocellum thermophilum (strain DSM 6725 / Z-1320)ANATD00169  UniProtKB/TrEMBL B9MMA5  Endo-1,4-beta-xylanase
[B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE00892  UniProtKB/TrEMBL Q0PRN5  glycoside hydrolase family 10 PFAM: glycoside hydrolase family 10; cellulosome protein dockerin type I; KEGG: hau:Haur_4805 glycoside hydrolase family protein
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH02965  UniProtKB/TrEMBL A9KQ55  Endo-1,4-beta-xylanase
[B] Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)CALS802266  UniProtKB/TrEMBL A4XM50  Endo-1,4-beta-xylanase
[B] Bradyrhizobium japonicumBRAJA02196  UniProtKB/TrEMBL Q89T09  Endo-1,4-beta-xylanase
[B] Sorangium cellulosum (strain So ce56)SORC506663  UniProtKB/TrEMBL A9GSV7  O-Glycosyl hydrolase
[B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD202618  UniProtKB/TrEMBL Q21HD6  Endo-1,4-beta-xylanase
[B] Pseudoalteromonas atlantica (strain T6c / BAA-1087)PSEA602628  UniProtKB/TrEMBL Q15SG8  Endo-1,4-beta-xylanase precursor
[B] Cellvibrio japonicus (strain Ueda107)CELJU02785  UniProtKB/TrEMBL B3PC74  Endo-1,4-beta-xylanase, xyn10D
[B] Xanthomonas axonopodis (pv. citri)XANAC04134  UniProtKB/TrEMBL Q8PEU1  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark endo-1,4-beta-xylanase A
[B] Xanthomonas campestris pv. campestrisXANCP04003  UniProtKB/TrEMBL Q8P3F6  Endo-1,4-beta-xylanase A
[B] Xanthomonas campestris pv. campestris (strain 8004)XANC804093  UniProtKB/TrEMBL Q4UNX8  endo-1,4-beta-xylanase A
[B] Xanthomonas campestris pv. campestris (strain B100)XANCB04312  UniProtKB/TrEMBL B0RZ11  Exported endo-1,4-beta-xylanase
[B] Xanthomonas campestris pv. vesicatoria (strain 85-10)XANC504262  UniProtKB/TrEMBL Q3BMC7  endo-1,4-beta-xylanase A
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP02210  UniProtKB/TrEMBL B1ZPQ7  Endo-1,4-beta-xylanase precursor