List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 17493

malate:quinone oxidoreductase
This group has 5 members: 5 [B]acteria
Fingerprint: FLICTNP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Macrococcus caseolyticus (strain JCSC5402)MACCJ00363  UniProtKB/TrEMBL B9EA09  Malate:quinone oxidoreductase
[B] Staphylococcus epidermidis (strain ATCC 12228)STAES00255  UniProtKB/Swiss-Prot MQO2_STAES  Probable malate:quinone oxidoreductase 2
[B] Staphylococcus epidermidis (strain ATCC 35984 / RP62A)STAEQ02235  UniProtKB/Swiss-Prot MQO2_STAEQ  identified by similarity to EGAD:9906; match to protein family HMM TIGR01320 malate:quinone oxidoreductase
[B] Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)STAS100081  UniProtKB/TrEMBL Q4A102  similar to gi|27467184|ref|NP_763821.1| [Staphylococcus epidermidis ATCC 12228], percent identity 84 in 493 aa, BLASTP E(): 0.0 putative malate:quinone oxidoreductase
[B] Thiomicrospira crunogena (strain XCL-2)THICR01860  UniProtKB/TrEMBL Q31EG0  FAD dependent oxidoreductase