List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 61349

dockerin type I
This group has 9 members: 2 [E]ukaryota 7 [B]acteria
Fingerprint: FKVGGNM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Aspergillus fumigatusASPFU09350  UniProtKB/TrEMBL Q4WB93  Avicelase III
[E] Magnaporthe griseaMAGGR05204  UniProtKB/TrEMBL A4RES4  Magnaporthe grisea hypothetical protein
[B] Phytoplasma sp. (strain STRAWB1)STRAW01856  UniProtKB/TrEMBL Q82M04  Putative secreted endo-1,4-beta-glucanase
[B] Thermobifida fusca (strain YX)THEFY01605  UniProtKB/TrEMBL Q47PH2  cellulose-binding, family II, bacterial type
[B] Clostridium acetobutylicumCLOAB00908  UniProtKB/TrEMBL Q97KK0  Probably secreted sialidase; several ASP-boxes and dockerin domain
[B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE01155  UniProtKB/TrEMBL B8I0I9  cellulosome protein dockerin type I PFAM: cellulosome protein dockerin type I; Kelch repeat-containing protein; KEGG: cth:Cthe_1398 cellulosome enzyme, dockerin type I
[B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH01352  UniProtKB/TrEMBL A3DFA0  Cellulosome enzyme, dockerin type I precursor
[B] Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)CALS801001  UniProtKB/TrEMBL A4XIG4  Type 3a, cellulose-binding domain protein precursor
[B] Cellvibrio japonicus (strain Ueda107)CELJU02386  UniProtKB/TrEMBL B3PKK9  Endo-1,4-beta-glucanase/xyloglucanase, putative, gly74A