List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 62752

group 1
This group has 12 members: 7 [A]rchaea 5 [B]acteria
Fingerprint: FIFSGNW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Archaeoglobus fulgidusARCFU00043  UniProtKB/TrEMBL O30192  First mannosyl transferase
[A] Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)METMJ00183  UniProtKB/TrEMBL A3CRW8  Glycosyl transferase, group 1
[A] Methanospirillum hungatei (strain JF-1 / DSM 864)METHJ02927  UniProtKB/TrEMBL Q2FRR9  glycosyl transferase, group 1
[A] Methanosaeta thermophila (strain DSM 6194 / PT)METTP01036  UniProtKB/TrEMBL A0B824  glycosyl transferase, group 1 PFAM: glycosyl transferase, group 1 KEGG: mac:MA1175 mannosyltransferase
[A] Methanosarcina acetivoransMETAC01125  UniProtKB/TrEMBL Q8TRK0  Mannosyltransferase
[A] Methanosarcina barkeri (strain Fusaro / DSM 804)METBF00354  UniProtKB/TrEMBL Q46FI9  mannosyltransferase
[A] Uncultured methanogenic archaeon RC-IUNCMA02467  UniProtKB/TrEMBL Q0W7E4  glycosyltransferase (group 1)
[B] Acaryochloris marina (strain MBIC 11017)ACAM101778  UniProtKB/TrEMBL B0CEG3  Glycosyl transferase, group 1
[B] Anabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT01101  UniProtKB/TrEMBL Q3ME47  Glycosyl transferase, group 1
[B] Anabaena sp. (strain PCC 7120)ANASP02800  UniProtKB/TrEMBL Q8YT92  Alr2832 protein
[B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102)NOSP700977  UniProtKB/TrEMBL B2IVC1  Glycosyl transferase, group 1
[B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)NITOC00696  UniProtKB/TrEMBL Q3JD33  Glycosyl transferase, group 1