List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 34493

Oligosaccharyl transferase STT3 subunit
This group has 10 members: 10 [A]rchaea
Fingerprint: FDGGSQN

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861)METS300708  UniProtKB/TrEMBL A5UL43  Oligosaccharyl transferase, STT3 subunit
[A] Methanosphaera stadtmanae (strain DSM 3091)METST00347  UniProtKB/TrEMBL Q2NHD2  conserved hypothetical membrane-spanning protein related to oligosaccharyl transferase; membrane protein
[A] Methanobacterium thermoautotrophicumMETTH01585  UniProtKB/TrEMBL O27660  Oligosaccharyl transferase STT3 subunit related protein
[A] Methanocaldococcus jannaschiiMETJA01568  UniProtKB/Swiss-Prot Y1525_METJA  Uncharacterized membrane protein MJ1525
[A] Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)META301392  UniProtKB/TrEMBL A6UWW3  Oligosaccharyl transferase STT3 subunit precursor
[A] Methanococcus maripaludisMETMP01424  UniProtKB/TrEMBL Q6LXC8  Oligosaccharyl transferase, STT3 subunit
[A] Methanococcus maripaludis (strain C5 / ATCC BAA-1333)METM500154  UniProtKB/TrEMBL A4FWA0  Oligosaccharyl transferase, STT3 subunit precursor
[A] Methanococcus maripaludis (strain C6 / ATCC BAA-1332)METM601235  UniProtKB/TrEMBL A9A9N9  Oligosaccharyl transferase STT3 subunit precursor
[A] Methanococcus maripaludis (strain C7 / ATCC BAA-1331)METM700662  UniProtKB/TrEMBL A6VH10  Oligosaccharyl transferase STT3 subunit precursor
[A] Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)METVS00723  UniProtKB/TrEMBL A6UQ69  Oligosaccharyl transferase STT3 subunit precursor