List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 200504

UDP-glucose 6-dehydrogenase
This group has 30 members: 30 [B]acteria
Fingerprint: FADDEAQ

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Chlorobium limicola (strain DSM 245 / NBRC 103803)CHLL201352  UniProtKB/TrEMBL B3ED43  Nucleotide sugar dehydrogenase precursor
[B] Chlorobium phaeobacteroides (strain DSM 266)CHLPD01442  UniProtKB/TrEMBL A1BGM9  UDP-glucose 6-dehydrogenase PFAM: UDP-glucose/GDP-mannose dehydrogenase KEGG: plt:Plut_0956 UDP-glucose 6-dehydrogenase
[B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78)CHLT300203  UniProtKB/TrEMBL B3QT32  Nucleotide sugar dehydrogenase
[B] Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)CHLSY03016  UniProtKB/TrEMBL B9LM82  Nucleotide sugar dehydrogenase
[B] Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)CHLAA02790  UniProtKB/TrEMBL A9WF67  Nucleotide sugar dehydrogenase precursor
[B] Thermosynechococcus elongatus (strain BP-1)THEEB00646  UniProtKB/TrEMBL Q8DL35  UDP-glucose 6-dehydrogenase
[B] Anabaena sp. (strain PCC 7120)ANASP00650  UniProtKB/TrEMBL Q8YZ29  UDP-glucose dehydrogenase
[B] Prochlorococcus marinus (strain MIT 9215)PROM201408  UniProtKB/TrEMBL A8G5Z5  UDP-glucose 6-dehydrogenase
[B] Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)HALOH02241  UniProtKB/TrEMBL B8D170  UDP-glucose 6-dehydrogenase
[B] Phenylobacterium zucineum (strain HLK1)PHEZH02946  UniProtKB/TrEMBL B4R905  UDP-glucose 6-dehydrogenase
[B] Rhodopseudomonas palustris (strain BisB18)RHOPB04079  UniProtKB/TrEMBL Q20YV5  UDP-glucose 6-dehydrogenase
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS01586  UniProtKB/TrEMBL Q13AQ9  UDP-glucose 6-dehydrogenase
[B] Rhodopseudomonas palustris (strain HaA2)RHOP201582  UniProtKB/TrEMBL Q2IZR5  UDP-glucose 6-dehydrogenase
[B] Bordetella avium (strain 197N)BORA103253  UniProtKB/TrEMBL Q2KTX7  UDP-glucose 6-dehydrogenase
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD00181  UniProtKB/TrEMBL A9HWM4  UDP-glucose dehydrogenase
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP801049  UniProtKB/TrEMBL B2JGR2  Nucleotide sugar dehydrogenase precursor
[B] Burkholderia phytofirmans (strain DSM 17436 / PsJN)BURPP01891  UniProtKB/TrEMBL B2T453  Nucleotide sugar dehydrogenase precursor
[B] Burkholderia pseudomalleiBURPS05291  UniProtKB/TrEMBL A8ENM4  Similar to Pseudomonas aeruginosa UDP-glucose 6-dehydrogenase Udg or Ugd or pa2022 SWALL:UDG_PSEAE (SWALL:O86422) (453 aa) fasta scores: E(): 5.7e-83, 51.97% id in 456 aa, and to Rhizobium meliloti UDP-glucose 6-dehydrogenase RkpK or r01082 or smc02641 SWALL:UDG_RHIME (SWALL:O54068) (437 aa) fasta scores: E(): 2.8e-70, 49.66% id in 453 aa. Note: Also similar to BPSL2511 Udg (467 aa) fasta scores: E(): 1.5e-121, 76.304% identity in 460 aa overlap UDP-glucose 6-dehydrogenase 2
[B] Burkholderia pseudomallei (strain 1106a)BURP006454  UniProtKB/TrEMBL A3P855  UDP-glucose 6-dehydrogenase
[B] Burkholderia pseudomallei (strain 1710b)BURP104618  UniProtKB/TrEMBL Q3JK28  UDP-glucose 6-dehydrogenase 2 identified by match to protein family HMM PF00984; match to protein family HMM PF02558; match to protein family HMM PF03720; match to protein family HMM PF03721
[B] Burkholderia pseudomallei (strain 668)BURP606544  UniProtKB/TrEMBL A3NMP4  UDP-glucose 6-dehydrogenase
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA03738  UniProtKB/TrEMBL Q2T7V5  UDP-glucose 6-dehydrogenase identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721
[B] Chromobacterium violaceumCHRVO03033  UniProtKB/TrEMBL Q7NTL3  identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1004 UDP-glucose dehydrogenase
[B] Azoarcus sp. (strain EbN1)AZOSE00456  UniProtKB/TrEMBL Q5P7V5  UDP-glucose dehydrogenase
[B] Desulfatibacillum alkenivorans (strain AK-01)DESAA01671  UniProtKB/TrEMBL B8FEJ4  Nucleotide sugar dehydrogenase
[B] Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)GEOBB02257  UniProtKB/TrEMBL B5EEF4  Nucleotide sugar dehydrogenase
[B] Sorangium cellulosum (strain So ce56)SORC502785  UniProtKB/TrEMBL A9GB39  Putative uncharacterized protein rkpK
[B] Erwinia tasmaniensis (strain DSM 17950 / ET1/99)ERWT901576  UniProtKB/TrEMBL B2VKX4  UDP-glucose dehydrogenase
[B] Photorhabdus luminescens (subsp. laumondii)PHOLL02431  UniProtKB/TrEMBL Q7N454  hypothetical protein; Highly similar to probable nucleotide sugar dehydrogenase and UDP-glucose dehydrogenase
[B] Cellvibrio japonicus (strain Ueda107)CELJU03326  UniProtKB/TrEMBL B3PFY0  UDP-glucose dehydrogenase