List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 185027

beta-1,4-xylosidase
This group has 13 members: 1 [E]ukaryota 12 [B]acteria
Fingerprint: EWYYASL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Magnaporthe griseaMAGGR00844  UniProtKB/TrEMBL A4UCD2  Magnaporthe grisea xylan 1,4-beta-xylosidase, putative
[B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083)BIFAA00426  UniProtKB/TrEMBL A1A0H6  beta-1,4-xylosidase Orthologue of L0234 intracellular xylan-degrading enzyme
[B] Bifidobacterium longum (strain DJO10A)BIFLD01851  UniProtKB/TrEMBL B3DR40  Beta-xylosidase
[B] Bacillus haloduransBACHD03615  UniProtKB/TrEMBL Q9K6P5  xylan beta-1,4-xylosidase
[B] Clostridium acetobutylicumCLOAB03393  UniProtKB/TrEMBL Q97DM1  Beta-xylosidase, family 43 glycosyl hydrolase
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH03347  UniProtKB/TrEMBL A9KTC1  Glycoside hydrolase family 43
[B] Lactobacillus brevis (strain ATCC 367 / JCM 1170)LACBA02138  UniProtKB/TrEMBL Q03N89  Beta-xylosidase
[B] Leuconostoc citreum (strain KM20)LEUCK00070  UniProtKB/TrEMBL B1MWI3  Beta-xylosidase
[B] Lactococcus lactis subsp. lactisLACLA01474  UniProtKB/TrEMBL Q9CFH1  Beta-1,4-xylosidase
[B] Sorangium cellulosum (strain So ce56)SORC504873  UniProtKB/TrEMBL A9FJU7  Xylan 1,4-beta-xylosidase
[B] Enterobacter sp. (strain 638)ENT3802968  UniProtKB/TrEMBL A4WD80  Alpha-N-arabinofuranosidase
[B] Klebsiella pneumoniae (strain 342)KLEP304794  UniProtKB/TrEMBL B5Y2L4  Beta-1,4-xylosidase
[B] Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)KLEP704628  UniProtKB/TrEMBL A6THN7  Puative beta-1,4-xylosidase; XynB