List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 282381

D-dopachrome decarboxylase
This group has 21 members: 21 [E]ukaryota
Fingerprint: SMGKPRE

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Homo sapiensHUMAN17975  Ensembl ENSP00000385714   -
[E] Pan troglodytesPANTR18901  Ensembl ENSPTRP00000024388   -
[E] Macaca mulattaMACMU09647  Ensembl ENSMMUP00000006052   -
[E] Cavia porcellusCAVPO00746  Ensembl ENSCPOP00000004190  
[E] Mus musculusMOUSE06908  UniProtKB/Swiss-Prot DOPD_MOUSE  D-dopachrome tautomerase
[E] Rattus norvegicusRATNO11688  UniProtKB/Swiss-Prot DOPD_RAT  D-dopachrome decarboxylase (EC 4.1.1.84) (D- dopachrome tautomerase). [Source:UniProtKB/Swiss- Prot;Acc:P80254]
[E] Canis familiarisCANFA15737  Ensembl ENSCAFP00000020669   -
[E] Bos taurusBOVIN08438  UniProtKB/Swiss-Prot DOPD_BOVIN  D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome tautomerase)
[E] Equus caballusHORSE11122  Ensembl ENSECAP00000018564   -
[E] Gallus gallusCHICK02355  Ensembl ENSGALP00000010251   -
[E] Anolis carolinensisANOCA13476  Ensembl ENSACAP00000008601  
[E] Xenopus tropicalisXENTR00877  UniProtKB/Swiss-Prot DOPD_XENTR   -
[E] Danio rerioDANRE17950  Ensembl ENSDARP00000065771  hypothetical protein LOC415237
[E] Branchiostoma floridaeBRAFL18191  UniProtKB/TrEMBL C3XV55  jgi|Brafl1|126425|estExt_fgenesh2_pg.C_2140051
[E] Daphnia pulexDAPPU14736   fgenesh1_kg.C_scaffold_78000007  jgi|Dappu1|93282|fgenesh1_kg.C_scaffold_78000007
[E] Pristionchus pacificusPRIPA28969   WBGene00118804  status:Partially_confirmed
[E] Caenorhabditis brenneriCAEBI17761   WBGene00157297  
[E] Caenorhabditis briggsaeCAEBR19126   CBG23344  
[E] Caenorhabditis elegansCAEEL15284  UniProtKB/Swiss-Prot MIF2_CAEEL  MIF-like protein mif-2.
[E] Caenorhabditis japonicaCAEJA02562   WBGene00121842  locus:Cjp-mif-2; status:Confirmed
[E] Caenorhabditis remaneiCAERE26839   WBGene00052397  locus:Cre-mif-2