List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 95220
cell division control protein 2 homolog
This group has 4 members: 4 [E]ukaryota
Fingerprint: ERISAKT
| [E] Helobdella robusta | HELRO11946 | 172067 | jgi|Helro1|172067 |
| [E] Trypanosoma brucei | TRYBB04136 | CC2H2_TRYBB | 100% identical to SP|P54665| Cell division control protein 2 homolog 2 (EC 2.7.1.37) {Trypanosoma brucei brucei} (PMID:7557404); go_function: protein serine/threonine kinase activity [goid 0004674]; go_function: ATP binding [goid 0005524]; go_process: protein amino acid phosphorylation [goid 0006468]; go_process: cell cycle [goid 0007049] cell division control protein 2 homolog 2 |
| [E] Populus trichocarpa | POPTR31015 | B9P5U7 | jgi|Poptr1_1|748306|estExt_Genewise1_v1.C_37120001 [DNA did not match protein] [DNA partly invalid] |
| [E] Arabidopsis thaliana | ARATH15341 | CKB11_ARATH | cell division control protein 2 homolog B (CDC2B), identical to cell division control protein 2 homolog B (Arabidopsis thaliana) SWISS-PROT:P25859; go_component: cellular component unknown [goid GO:0005515@[IPI]; GO:0008372@[NR]] [evidence ND]; go_function: kinase activity [goid GO:0016301] [evidence ISS]; go_function: cyclin-dependent protein kinase activity [goid GO:0004693] [evidence ISS] [pmid 1618302]; go_process: DNA endoreduplication [goid GO:0042023] [evidence TAS] [pmid 15863515]; go_process: unidimensional cell growth [goid GO:0009826] [evidence IMP] [pmid 10521519] CDC2B (CDC2-LIKE GENE); kinase |