List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 99780

30 kDa subunit
This group has 7 members: 5 [A]rchaea 2 [B]acteria
Fingerprint: ERECHEM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Pyrobaculum aerophilumPYRAE02045  UniProtKB/TrEMBL Q8ZU67  NADH-ubiquinone oxidoreductase subunit
[A] Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)PYRAR00961  UniProtKB/TrEMBL A4WJL3  NADH dehydrogenase (Ubiquinone), 30 kDa subunit
[A] Pyrobaculum calidifontis (strain JCM 11548 / VA1)PYRCJ01931  UniProtKB/TrEMBL A3MXK5  NADH dehydrogenase (Ubiquinone), 30 kDa subunit
[A] Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)PYRIL00329  UniProtKB/TrEMBL A1RRD1  NADH dehydrogenase (Ubiquinone), 30 kDa subunit
[A] Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta)THENV01747  UniProtKB/TrEMBL B1YB06  NADH dehydrogenase (Ubiquinone) 30 kDa subunit
[B] Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)THET201905  UniProtKB/Swiss-Prot NQO5_THET2  NADH-quinone oxidoreductase subunit 5
[B] Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)THET800086  UniProtKB/Swiss-Prot NQO5_THET8  NADH-quinone oxidoreductase subunit 5