List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 328502

Alpha-L-rhamnosidase
This group has 23 members: 4 [E]ukaryota 1 [A]rchaea 18 [B]acteria
Fingerprint: PGWTSYD

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Phaeosphaeria nodorumPHANO15603   SNU14400.1  hypothetical protein
[E] Aspergillus fumigatusASPFU08563  UniProtKB/TrEMBL Q4WL67  alfa-L-rhamnosidase, putative
[E] Magnaporthe griseaMAGGR03820  UniProtKB/TrEMBL A4R0A3  Magnaporthe grisea hypothetical protein
[E] Cryptococcus neoformansCRYNE03637  UniProtKB/TrEMBL Q5KEJ5  alfa-L-rhamnosidase, putative
[A] Caldivirga maquilingensis (strain DSMZ 13496 / IC-167)CALMQ00167  UniProtKB/TrEMBL A8MA89  Alpha-L-rhamnosidase
[B] Solibacter usitatus (strain Ellin6076)SOLUE05432  UniProtKB/TrEMBL Q01V09  alpha-L-rhamnosidase PFAM: glycoside hydrolase family 2, sugar binding; alpha-L-rhamnosidase; alpha-L-rhamnosidase N-terminal domain protein KEGG: bfr:BF0596 putative alpha-rhamnosidase
[B] Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)ARTCA00421  UniProtKB/TrEMBL B8HAG4  Alpha-L-rhamnosidase
[B] Phytoplasma sp. (strain STRAWB1)STRAW00827  UniProtKB/TrEMBL Q82PP4  Putative rhamnosidase
[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ104049  UniProtKB/TrEMBL A5FCI1  Alpha-L-rhamnosidase
[B] Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)CHLSY00379  UniProtKB/TrEMBL B9LI92  Alpha-L-rhamnosidase
[B] Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)CHLAA00353  UniProtKB/TrEMBL A9WDK5  Alpha-L-rhamnosidase
[B] Roseiflexus castenholzii (strain DSM 13941 / HLO8)ROSCS01821  UniProtKB/TrEMBL A7NKE5  alpha-L-rhamnosidase PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein KEGG: rrs:RoseRS_2735 alpha-L-rhamnosidase
[B] Roseiflexus sp. (strain RS-1)ROSS102646  UniProtKB/TrEMBL A5UWV4  Alpha-L-rhamnosidase
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT600285  UniProtKB/TrEMBL B5YC64  Alpha-rhamnosidase
[B] Bacillus cereus (strain AH187)BACC702158  UniProtKB/TrEMBL B7HQ31  Alfa-L-rhamnosidase
[B] Bacillus cereus (strain ATCC 10987)BACC102239  UniProtKB/TrEMBL Q738X8  identified by similarity to GP:5763989; match to protein family HMM PF05592 rhamnosidase A
[B] Bacillus cereus (strain ZK)BACCZ01992  UniProtKB/TrEMBL Q63BV6  alfa-L-rhamnosidase
[B] Bacillus thuringiensis (strain Al Hakam)BACAH01885  UniProtKB/TrEMBL A0RDL8  alfa-L-rhamnosidase
[B] Bacillus thuringiensis (subsp. konkukian)BACHK01977  UniProtKB/TrEMBL Q6HJC8  alfa-L-rhamnosidase
[B] Rhodopirellula balticaRHOBA00373  UniProtKB/TrEMBL Q7UYD5  PMID: 10632887 best DB hits: BLAST: embl:CAB53341.1; (AJ238748) alfa-L-rhamnosidase [Clostridium; E=1e-103 pir:T36406; hypothetical protein SCF34.07 - Streptomyces coelicolor; E=4e-89 embl:CAB55731.1; (AL117387) putative secreted protein [Streptomyces; E=1e-69 PFAM: PF02083; Urotensin II; E=0.87 alfa-L-rhamnosidase
[B] Caulobacter crescentusCAUCR00966  UniProtKB/TrEMBL Q9A9K2  Alpha-L-rhamnosidase, putative
[B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP101656  UniProtKB/TrEMBL A5INB4  Alpha-L-rhamnosidase
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP03035  UniProtKB/TrEMBL B1ZZ16  Alpha-L-rhamnosidase precursor