List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 303495

Ribonuclease P protein component 3
This group has 11 members: 11 [A]rchaea
Fingerprint: ENPRVDI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Haloarcula marismortuiHALMA01039  UniProtKB/Swiss-Prot RNP3_HALMA  ribonuclease P subunit p30
[A] Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)HALS301025  UniProtKB/Swiss-Prot RNP3_HALS3  Putative uncharacterized protein
[A] Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)HALLT00947  UniProtKB/Swiss-Prot RNP3_HALLT  RNase P subunit p30
[A] Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)NATPD01814  UniProtKB/Swiss-Prot RNP3_NATPD  ribonuclease P protein component 3
[A] Methanobacterium thermoautotrophicumMETTH00683  UniProtKB/Swiss-Prot RNP3_METTH  Ribonuclease P protein component 3
[A] Methanosaeta thermophila (strain DSM 6194 / PT)METTP01329  UniProtKB/TrEMBL A0B8W8  RNase P subunit p30 PFAM: RNase P subunit p30 KEGG: mma:MM2618 putative ribonuclease P subunit Rpp30
[A] Methanococcoides burtonii (strain DSM 6242)METBU00177  UniProtKB/Swiss-Prot RNP3_METBU  Ribonuclease P
[A] Methanosarcina acetivoransMETAC01709  UniProtKB/Swiss-Prot RNP3_METAC  Ribonuclease P protein component 3
[A] Methanosarcina barkeri (strain Fusaro / DSM 804)METBF02401  UniProtKB/Swiss-Prot RNP3_METBF  putative ribonuclease P subunit Rpp30
[A] Methanosarcina mazeiMETMA02560  UniProtKB/Swiss-Prot RNP3_METMA  Ribonuclease P protein component 3
[A] Uncultured methanogenic archaeon RC-IUNCMA00989  UniProtKB/TrEMBL Q0W2Z3  putative RNase P, component 3