List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 196472

Glutamate racemase
This group has 13 members: 13 [B]acteria
Fingerprint: GCTHYLH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus subtilisBACSU02679  UniProtKB/Swiss-Prot MURI2_BACSU  Glutamate racemase 2
[B] Fusobacterium nucleatum subsp. nucleatumFUSNN01718  UniProtKB/Swiss-Prot MURI_FUSNN  Glutamate racemase
[B] Campylobacter concisus (strain 13826)CAMC100965  UniProtKB/Swiss-Prot MURI_CAMC1  Glutamate racemase
[B] Campylobacter curvus (strain 525.92)CAMC501005  UniProtKB/Swiss-Prot MURI_CAMC5  Glutamate racemase
[B] Borrelia afzelii (strain PKo)BORAP00099  UniProtKB/TrEMBL Q0SP64  Glutamate racemase
[B] Borrelia burgdorferiBORBU00100  UniProtKB/Swiss-Prot MURI_BORBU  similar to SP:P22634 GB:L14556 GB:V00347 GB:V00348 PID:290428 percent identity: 30.69; identified by sequence similarity; putative glutamate racemase (murI)
[B] Borrelia burgdorferi (strain ZS7)BORBZ00094  UniProtKB/TrEMBL B7J133  Glutamate racemase
[B] Borrelia duttonii (strain Ly)BORDL00099  UniProtKB/TrEMBL B5RLH4  Glutamate racemase
[B] Borrelia gariniiBORGA00100  UniProtKB/TrEMBL Q662R2  Glutamate racemase
[B] Borrelia hermsii (strain DAH)BORHD00095  UniProtKB/TrEMBL B2S1T4  Glutamate racemase
[B] Borrelia recurrentis (strain A1)BORRA00096  UniProtKB/TrEMBL B5RQS7  Glutamate racemase
[B] Borrelia turicatae (strain 91E135)BORT900096  UniProtKB/TrEMBL A1QYP9  Glutamate racemase
[B] Thermosipho africanus (strain TCF52B)THEAB01449  UniProtKB/TrEMBL B7ID81  Glutamate racemase