List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 185048

Alpha-N-arabinofuranosidase precursor
This group has 11 members: 11 [B]acteria
Fingerprint: EFDRIEL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides fragilisBACFR00329  UniProtKB/TrEMBL Q64ZJ8  similar to gp:AE016941_2 [Bacteroides thetaiotaomicron VPI-5482], percent identity 73 in 347 aa, BLASTP E(): e-163 putative glycosylhydrolase
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN00273  UniProtKB/TrEMBL Q5LIH4  Similar to Streptomyces chartreusis alpha-L-arabinofuranosidase II precursor SWALL:ABF2_STRCX (SWALL:P82594) (328 aa) fasta scores: E(): 2.7e-06, 33.33% id in 324 aa, and to Bacteroides thetaiotaomicron putative glycosylhydrolase BT3515 SWALL:AAO78621 (EMBL:AE016941) (389 aa) fasta scores: E(): 2e-115, 73.48% id in 347 aa, and to Bacteroides thetaiotaomicron putative glycosylhydrolase BT3467 SWALL:AAO78573 (EMBL:AE016940) (365 aa) fasta scores: E(): 9.9e-95, 60.57% id in 350 aa putative exported protein
[B] Bacteroides thetaiotaomicronBACTN03478  UniProtKB/TrEMBL Q8A1Z3  Putatuve glycosylhydrolase
[B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD200780  UniProtKB/TrEMBL Q21MN0  Alpha-L-arabinofuranosidase
[B] Shewanella baltica (strain OS223)SHEB202083  UniProtKB/TrEMBL B8EEP6  Alpha-N-arabinofuranosidase
[B] Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)SHEPC02017  UniProtKB/TrEMBL A4Y743  Alpha-N-arabinofuranosidase precursor
[B] Shewanella sp. (strain ANA-3)SHESA02055  UniProtKB/TrEMBL A0KWY8  glycoside hydrolase, family 43 PFAM: glycoside hydrolase, family 43 KEGG: bha:BH1867 hypothetical protein
[B] Shewanella sp. (strain MR-4)SHESM01976  UniProtKB/TrEMBL Q0HIQ4  Alpha-N-arabinofuranosidase precursor
[B] Shewanella sp. (strain MR-7)SHESR01960  UniProtKB/TrEMBL Q0HV82  Alpha-N-arabinofuranosidase precursor
[B] Shewanella sp. (strain W3-18-1)SHESW01913  UniProtKB/TrEMBL A1RJE7  Alpha-N-arabinofuranosidase PFAM: glycoside hydrolase, family 43 KEGG: shm:Shewmr7_1984 alpha-N-arabinofuranosidase
[B] Cellvibrio japonicus (strain Ueda107)CELJU00775  UniProtKB/TrEMBL B3PKP9  Alpha-L-arabinfuranosidase, putative, abf43L