List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 205355

protein of unknown function DUF182 PFAM: protein of unknown function DUF182
This group has 16 members: 16 [B]acteria
Fingerprint: RRNSQLR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Deinococcus geothermalis (strain DSM 11300)DEIGD00382  UniProtKB/TrEMBL Q1J1E6  protein of unknown function DUF182 PFAM: protein of unknown function DUF182: (1.2e-22) KEGG: sma:SAV1536 xanthine dehydrogenase accessory factor, ev=1e-47, 38% identity
[B] Bacillus amyloliquefaciens (strain FZB42)BACA203584  UniProtKB/TrEMBL A7ZAK8  Putative xanthine dehydrogenase
[B] Bacillus cereus (strain ATCC 14579 / DSM 31)BACCR02987  UniProtKB/TrEMBL Q81BJ2  Xanthine dehydrogenase subunit
[B] Bacillus haloduransBACHD01938  UniProtKB/TrEMBL Q9KBF4  BH1974 unknown conserved protein
[B] Bacillus subtilisBACSU03249  UniProtKB/Swiss-Prot XDHA_BACSU  Probable xanthine dehydrogenase subunit A
[B] Geobacillus kaustophilusGEOKA00374  UniProtKB/TrEMBL Q5L314  hypothetical conserved protein
[B] Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA00917  UniProtKB/TrEMBL A9HC29  Putative uncharacterized protein
[B] Pseudoalteromonas atlantica (strain T6c / BAA-1087)PSEA602489  UniProtKB/TrEMBL Q15SV9  Hypothetical protein
[B] Psychromonas ingrahamii (strain 37)PSYIN01731  UniProtKB/TrEMBL A1SVU6  isoquinoline 1-oxidoreductase maturation factor PFAM: protein of unknown function DUF182 KEGG: son:SO3051 hypothetical xanthine dehydrogenase accessory factor
[B] Shewanella loihica (strain BAA-1088 / PV-4)SHELP02258  UniProtKB/TrEMBL A3QF86  protein of unknown function DUF182 PFAM: protein of unknown function DUF182 KEGG: sdn:Sden_2226 protein of unknown function DUF182
[B] Pseudomonas entomophila (strain L48)PSEE401992  UniProtKB/TrEMBL Q1IBH1  conserved hypothetical protein Evidence 4 : Homologs of previously reported genes of unknown function
[B] Pseudomonas mendocina (strain ymp)PSEMY02163  UniProtKB/TrEMBL A4XUE4  Putative uncharacterized protein
[B] Pseudomonas putida (strain GB-1)PSEPG02271  UniProtKB/TrEMBL B0KNS1  protein of unknown function DUF182 PFAM: protein of unknown function DUF182 KEGG: pen:PSEEN2169 hypothetical protein
[B] Pseudomonas putida (strain W619)PSEPW02821  UniProtKB/TrEMBL B1J983  Putative uncharacterized protein
[B] Stenotrophomonas maltophilia (strain K279a)STRMK02341  UniProtKB/TrEMBL B2FS82  Putative uncharacterized protein
[B] Stenotrophomonas maltophilia (strain R551-3)STRM501980  UniProtKB/TrEMBL B4SJD9  Putative uncharacterized protein