List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 74829

ortholog of Bordetella pertussis
This group has 16 members: 8 [A]rchaea 8 [B]acteria
Fingerprint: AFAPQLY

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Sulfolobus acidocaldariusSULAC01589  UniProtKB/TrEMBL Q4J857  conserved protein
[A] Sulfolobus islandicus (strain L.S.2.15 / Lassen #1)SULIL00422  UniProtKB/TrEMBL C3MLH8  
[A] Sulfolobus islandicus (strain M.14.25 / Kamchatka #1)SULIM00434  UniProtKB/TrEMBL C3MUW4  
[A] Sulfolobus islandicus (strain M.16.27)SULIA00452  UniProtKB/TrEMBL C3N2J5  
[A] Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1)SULIY00405  UniProtKB/TrEMBL C3NA17  
[A] Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2)SULIN02296  UniProtKB/TrEMBL C3NLI5  
[A] Sulfolobus solfataricusSULSO01862  UniProtKB/Swiss-Prot DLHH_SULSO  Putative carboxymethylenebutenolidase
[A] Sulfolobus tokodaiiSULTO02669  UniProtKB/TrEMBL Q96XK4  hypothetical protein
[B] Frankia sp. (strain EAN1pec)FRASN05915  UniProtKB/TrEMBL A8LCA3  Carboxymethylenebutenolidase
[B] Rhodospirillum centenum (strain ATCC 51521 / SW)RHOCS01470  UniProtKB/TrEMBL B6IN29  Carboxymethylenebutenolidase, putative
[B] Bordetella bronchisepticaBORBR01326  UniProtKB/TrEMBL Q7WMQ8  ortholog of Bordetella pertussis (BX470248) BP2713 putative hydrolase
[B] Bordetella parapertussisBORPA01106  UniProtKB/TrEMBL Q7WB90  ortholog of Bordetella pertussis (BX470248) BP2713 putative hydrolase
[B] Bordetella pertussisBORPE02488  UniProtKB/TrEMBL Q7VVF6  Similar to Methylobacterium extorquens putative carboxymethylenebutenolidase SW:DLHH_METEX (P71505) (291 aa) fasta scores: E(): 4.8e-59, 56.8% id in 294 aa. Also similar to BP1256, 55.253% identity (55.469% ungapped) in 257 aa overlap. putative hydrolase
[B] Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)ACIF202075  UniProtKB/TrEMBL B7J5J8  Carboxymethylenebutenolidase family protein
[B] Acidithiobacillus ferrooxidans (strain ATCC 53993)ACIF501773  UniProtKB/TrEMBL B5EL00  Carboxymethylenebutenolidase
[B] Enterobacter sakazakii (strain ATCC BAA-894)ENTS803596  UniProtKB/TrEMBL A7MQM0  Putative uncharacterized protein