OMA Group 271956

ribonuclease ph


This group has 992 members: E1 A2 B989

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TaxonProtein IDCross referenceFunction annotation
EOryza sativa subsp. indicaORYSI37746unknown xref logo BGIOSGA040246-PA
AAciduliprofundum boonei (strain DSM 19572 / T469)ACIB400411UniProtKB/TrEMBL B5IAD2Ribonuclease PH
AAciduliprofundum sp. (strain MAR08-339)ACIS000587UniProtKB/TrEMBL L0HN68ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)ACIC502673UniProtKB/TrEMBL C1F3D1tRNA nucleotidyltransferase
BGranulicella tundricola MP5ACTX9GRATM02413UniProtKB/TrEMBL E8X5H3ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: aca:ACP_2825 tRNA nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BTerriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63)TERRK02293UniProtKB/TrEMBL I3ZI88RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; manually curated
BTerriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)TERSS00769UniProtKB/TrEMBL E8V6E7ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: aca:ACP_2825 tRNA nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSolibacter usitatus (strain Ellin6076)SOLUE07537UniProtKB/Swiss-Prot RNPH_SOLUEribonuclease PH KEGG: aba:Acid345_1616 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BChloracidobacterium thermophilum (strain B)CHLTF00297UniProtKB/TrEMBL G2LE15RNAse PH
BKoribacter versatilis (strain Ellin345)KORVE01612UniProtKB/TrEMBL Q1IR82ribonuclease PH
BAcidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)ACIFD01664UniProtKB/TrEMBL C7M109Ribonuclease PH
BArcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018)ARCHD01049UniProtKB/TrEMBL D7BPH4Ribonuclease PH
BMobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125)MOBCV00087UniProtKB/TrEMBL D6ZI57ribonuclease PH COG: COG0689; Pfam: PF01138,PF03725; InterPro: IPR002381
BCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)CATAD07417UniProtKB/TrEMBL C7QB87Ribonuclease PH
BCorynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)CORA702065UniProtKB/TrEMBL C3PIN6Ribonuclease PH
BCorynebacterium diphtheriae (strain 241)CORD201731ncbi logo AEX44814.1ribonuclease PH
BCorynebacterium diphtheriae (strain 31A)CORD301809ncbi logo AEX42516.1ribonuclease PH
BCorynebacterium diphtheriae (strain ATCC 27012 / C7 (beta))CORD701789UniProtKB/TrEMBL H2GWL9ribonuclease PH
BCorynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)CORDI01803UniProtKB/Swiss-Prot RNPH_CORDIRibonuclease PH
BCorynebacterium diphtheriae (strain CDCE 8392)CORDD01700ncbi logo AEX72709.1ribonuclease PH
BCorynebacterium diphtheriae (strain HC01)CORDH01735ncbi logo AEX75004.1ribonuclease PH
BCorynebacterium diphtheriae (strain HC02)CORDJ01731ncbi logo AEX77245.1ribonuclease PH
BCorynebacterium diphtheriae (strain HC03)CORDK01711ncbi logo AEX79464.1ribonuclease PH
BCorynebacterium diphtheriae (strain HC04)CORDL01714ncbi logo AEX81723.1ribonuclease PH
BCorynebacterium diphtheriae (strain PW8)CORDW01732ncbi logo AEX70471.1ribonuclease PH
BCorynebacterium diphtheriae (strain VA01)CORDV01683ncbi logo AEX83965.1ribonuclease PH
BCorynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)COREF02348UniProtKB/Swiss-Prot RNPH_COREFputative ribonuclease CE2401, similar to U00014-5|AAA50880.1| percent identity: 64 in 238 aa
BCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)CORGL02492UniProtKB/Swiss-Prot RNPH_CORGLRibonuclease PH
BCorynebacterium glutamicum (strain ATCC 13032 / K051)CORGK02406ncbi logo CCH25635.1ribonuclease PH
BCorynebacterium glutamicum (strain R)CORGB02457UniProtKB/Swiss-Prot RNPH_CORGBHypothetical protein
BCorynebacterium jeikeium (strain K411)CORJK00472UniProtKB/TrEMBL Q4JX02ribonuclease PH
BCorynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717)CORK401341UniProtKB/Swiss-Prot RNPH_CORK4Ribonuclease PH
BCorynebacterium pseudotuberculosis (strain 1002)CORP101641UniProtKB/TrEMBL D9Q472Ribonuclease PH
BCorynebacterium pseudotuberculosis (strain C231)CORP201620UniProtKB/TrEMBL D9QC43Ribonuclease PH
BCorynebacterium pseudotuberculosis (strain FRC41)CORPF01657UniProtKB/TrEMBL A0A0F6BG52Ribonuclease PH
BCorynebacterium pseudotuberculosis (strain I19)CORP901649ncbi logo ADO26921.1Ribonuclease PH
BCorynebacterium resistens (strain DSM 45100 / JCM 12819 / GTC 2026)CORRG00424UniProtKB/TrEMBL F8DY56ribonuclease PH RNase PH
BCorynebacterium ulcerans (strain BR-AD22)CORUB01820UniProtKB/TrEMBL G0CX36ribonuclease PH RNase PH
BCorynebacterium urealyticum (strain ATCC 43042 / DSM 7109)CORU701457UniProtKB/TrEMBL B1VGW9Ribonuclease PH
BCorynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131)CORVD00735UniProtKB/TrEMBL G0HA71ribonuclease PH RNase PH
BGordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667)GORB401826UniProtKB/TrEMBL D0L9N7Ribonuclease PH
BAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)AMYSD03602UniProtKB/TrEMBL F6ES59Ribonuclease PH
BMycobacterium abscessus (strain ATCC 19977 / DSM 44196)MYCA901465UniProtKB/Swiss-Prot RNPH_MYCA9Probable ribonuclease PH
BMycobacterium avium (strain 104)MYCA101469UniProtKB/Swiss-Prot RNPH_MYCA1ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BMycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)MYCPA02396UniProtKB/Swiss-Prot RNPH_MYCPARibonuclease PH
BMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)MYCIA01631UniProtKB/TrEMBL H8IMS5ribonuclease PH
BMycobacterium chubuense (strain NBB4)MYCCN03621UniProtKB/TrEMBL I4BMF6RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BMycobacterium gilvum (strain PYR-GCK)MYCGI02275UniProtKB/Swiss-Prot RNPH_MYCGIribonuclease PH TIGRFAM: ribonuclease PH KEGG: mmc:Mmcs_3844 ribonuclease PH
BMycobacterium sp. (strain Spyr1)MYCSR01674UniProtKB/TrEMBL E6TAC9
BMycobacterium leprae (strain Br4923)MYCLB01161UniProtKB/Swiss-Prot RNPH_MYCLBRibonuclease PH
BMycobacterium leprae (strain TN)MYCLE01160UniProtKB/Swiss-Prot RNPH_MYCLERibonuclease PH
BMycobacterium marinum (strain ATCC BAA-535 / M)MYCMM03947UniProtKB/TrEMBL B2HQF7Ribonuclease RphA
BMycobacterium rhodesiae (strain NBB3)MYCRN03692UniProtKB/TrEMBL G8RXF7ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)MYCS204626UniProtKB/Swiss-Prot RNPH_MYCS2Ribonuclease PH
BMycobacterium sp. (strain JDM601)MYCSD01334UniProtKB/TrEMBL F5YX74ribonuclease RphA
BMycobacterium sp. (strain JLS)MYCSJ03763UniProtKB/Swiss-Prot RNPH_MYCSJribonuclease PH KEGG: mmc:Mmcs_3844 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BMycobacterium sp. (strain KMS)MYCSK03825UniProtKB/Swiss-Prot RNPH_MYCSKribonuclease PH KEGG: mmc:Mmcs_3844 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BMycobacterium sp. (strain MCS)MYCSS03805UniProtKB/Swiss-Prot RNPH_MYCSSRibonuclease PH
BMycobacterium africanum (strain GM041182)MYCA001355UniProtKB/TrEMBL F8M6S4putative ribonuclease RPHA (RNase PH) (tRNA nucleotidyltransferase)
BMycobacterium bovis (strain ATCC BAA-935 / AF2122/97)MYCBO03569UniProtKB/Swiss-Prot RNPH_MYCBOPROBABLE RIBONUCLEASE RPHA (RNase PH) (tRNA nucleotidyltransferase) Mb1375, rphA, len: 259 aa. Equivalent to Rv1340, len: 259 aa, from Mycobacterium tuberculosis strain H37Rv, (99.6% identity in 259 aa overlap). Probable rphA, Ribonuclease ph (EC 2.7.7.56), highly similar to others e.g. RNPH_MYCLE|P37939 from Mycobacterium leprae (259 aa), FASTA scores: opt: 1524, E(): 0, (88.8% identity in 259 aa overlap). BELONGS TO THE RNASE PH FAMILY.
BMycobacterium bovis (strain BCG / Pasteur 1173P2)MYCBP01375UniProtKB/Swiss-Prot RNPH_MYCBPProbable ribonuclease rphA
BMycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)MYCBT01364UniProtKB/Swiss-Prot RNPH_MYCBTRibonuclease PH
BMycobacterium canettii (strain CIPT 140010059)MYCCP01343UniProtKB/TrEMBL G0TIE6putative ribonuclease RPHA (RNase PH) (tRNA nucleotidyltransferase)
BMycobacterium tuberculosisMYCTU01355UniProtKB/Swiss-Prot RNPH_MYCTURibonuclease PH pmp logo
BMycobacterium tuberculosis (strain ATCC 25177 / H37Ra)MYCTA01359UniProtKB/Swiss-Prot RNPH_MYCTARibonuclease PH
BMycobacterium tuberculosis (strain CCDC5079)MYCTC01235ncbi logo AEJ46431.1rph, ribonuclease PH
BMycobacterium tuberculosis (strain CCDC5180)MYCTD01222ncbi logo AEJ50069.1rph, ribonuclease PH
BMycobacterium tuberculosis (strain F11)MYCTF01327ncbi logo EAX13223.1ribonuclease rphA (RNase ph) Mapped to H37Rv Rv1340
BMycobacterium tuberculosis (strain KZN 1435 / MDR)MYCTK02666ncbi logo ACT25718.1Ribonuclease PH
BMycobacterium ulcerans (strain Agy99)MYCUA03162UniProtKB/Swiss-Prot RNPH_MYCUAribonuclease RphA cytoplasmic protein RNase ph is a phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates [catalytic activity: {tRNA}(n+1) + phosphate = {tRNA}(N) + a nucleoside diphosphate]
BMycobacterium vanbaalenii (strain DSM 7251 / PYR-1)MYCVP04137UniProtKB/Swiss-Prot RNPH_MYCVPribonuclease PH KEGG: mmc:Mmcs_3844 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BNocardia cyriacigeorgica (strain GUH-2)NOCCG01152UniProtKB/TrEMBL H6R3M3Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1925027, 1512252; Product type e : enzyme
BNocardia farcinica (strain IFM 10152)NOCFA01102UniProtKB/Swiss-Prot RNPH_NOCFARibonuclease PH
BRhodococcus equi (strain 103S)RHOE101698UniProtKB/TrEMBL E4WG05Ribonuclease PH
BRhodococcus erythropolis (strain PR4 / NBRC 100887)RHOE403871UniProtKB/Swiss-Prot RNPH_RHOE4Ribonuclease PH
BRhodococcus sp. (strain RHA1)RHOSR01396ncbi logo ABG93251.1TRNA nucleotidyltransferase
BRhodococcus opacus (strain B4)RHOOB01141UniProtKB/TrEMBL C1AVV8Ribonuclease PH
BSegniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)SEGRD01499UniProtKB/TrEMBL D6Z7R6Ribonuclease PH
BTsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040)TSUPD01239UniProtKB/TrEMBL D5UWQ1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: rer:RER_38790 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BAcidothermus cellulolyticus (strain ATCC 43068 / 11B)ACIC101680UniProtKB/TrEMBL A0LVJ6ribonuclease PH KEGG: sco:SCO2904 putative ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BFrankia sp. (strain CcI3)FRASC00848UniProtKB/Swiss-Prot RNPH_FRASCRNAse PH
BFrankia sp. (strain EAN1pec)FRASN05476UniProtKB/Swiss-Prot RNPH_FRASNRibonuclease PH
BFrankia sp. (strain EuI1c)FRASU05698UniProtKB/TrEMBL E3IX17ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; manually curated; KEGG: gob:Gobs_1364 ribonuclease PH; TIGRFAM: ribonuclease PH
BFrankia symbiont subsp. Datisca glomerataFRADG01095UniProtKB/TrEMBL F8B0B2Ribonuclease PH KEGG: fri:FraEuI1c_5805 ribonuclease PH; manually curated; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; HAMAP: Ribonuclease phosphorolytic, bacterial-type
BBlastococcus saxobsidens (strain DD2)BLASD01103UniProtKB/TrEMBL H6RW99RNase PH Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512253; Product type e : enzyme
BGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)GEOOG01283UniProtKB/TrEMBL D2SBF1Ribonuclease PH
BModestobacter marinus (strain BC501)MODMB01375UniProtKB/TrEMBL I4ETY8RNase PH Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512253; Product type e : enzyme
BNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104)NAKMY01609UniProtKB/TrEMBL C8XFY0Ribonuclease PH
BStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)STANL01526UniProtKB/TrEMBL D3PW92Ribonuclease PH
BKineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD03726UniProtKB/TrEMBL A6WEI7Ribonuclease PH
BBeutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)BEUC102713UniProtKB/TrEMBL C5BY79Ribonuclease PH
BCellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)CELFA01344UniProtKB/TrEMBL F4H518ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134)CELFN01301UniProtKB/TrEMBL D5UCB0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: bcv:Bcav_2734 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCellvibrio gilvus (strain ATCC 13127 / NRRL B-14078)CELGA02186UniProtKB/TrEMBL F8A0P6ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BBrachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)BRAFD01922UniProtKB/TrEMBL C7ME06RNAse PH
BKytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541)KYTSD00930UniProtKB/TrEMBL C7NG41RNAse PH
BClavibacter michiganensis subsp. michiganensis (strain NCPPB 382)CLAM301312UniProtKB/TrEMBL A5CQI7Ribonuclease PH
BClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1)CLAMS02025UniProtKB/TrEMBL B0RFB1Ribonuclease PH
BLeifsonia xyli subsp. xyli (strain CTCB07)LEIXX01062UniProtKB/Swiss-Prot RNPH_LEIXXRibonuclease PH
BMicrobacterium testaceum (strain StLB037)MICTS03151UniProtKB/TrEMBL E8NC79RNase PH
BArthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117)ARTAR01234UniProtKB/TrEMBL E1VV50tRNA nucleotidyltransferase removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BArthrobacter aurescens (strain TC1)ARTAT02450UniProtKB/TrEMBL A1R7S9Ribonuclease PH
BArthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)ARTCA02273UniProtKB/TrEMBL B8HAW4Ribonuclease PH
BArthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)ARTPP02321UniProtKB/TrEMBL F0M5X8RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BArthrobacter sp. (strain FB24)ARTS202554UniProtKB/TrEMBL A0JY40ribonuclease PH KEGG: lxx:Lxx13580 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)KOCRD00998UniProtKB/TrEMBL B2GM08Ribonuclease PH
BMicrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230)MICLC00776UniProtKB/TrEMBL C5CA96RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)RENSM01406UniProtKB/TrEMBL A9WNP6Ribonuclease PH
BRothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA)ROTDC01733UniProtKB/TrEMBL E3H1B2Ribonuclease PH
BRothia mucilaginosa (strain DY-18)ROTMD01263UniProtKB/TrEMBL D2NTX0Ribonuclease PH
BXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)XYLCX01052UniProtKB/TrEMBL D1BZD9ribonuclease PH KEGG: azo:azo3963 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BTropheryma whipplei (strain TW08/27)TROW800609UniProtKB/Swiss-Prot Q83HF6ribonuclease PH Similar to Escherichia coli ribonuclease PH Rph or b3643 SWALL:RNPH_ECOLI (SWALL:P03842) (238 aa) fasta scores: E(): 5.3e-42, 49.57% id in 236 aa, and to Bifidobacterium longum NCC2705 probable ribonuclease PH bl0286 SWALL:AAN24126 (EMBL:AE014647) (258 aa) fasta scores: E(): 3.3e-46, 54.39% id in 239 aa
BTropheryma whipplei (strain Twist)TROWT00620UniProtKB/Swiss-Prot RNPH_TROWTRibonuclease PH
BActinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431)ACTM400945UniProtKB/TrEMBL I0GZI0putative ribonuclease PH
BActinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)ACTS501054UniProtKB/TrEMBL G8RZ65ribonuclease PH RNase PH
BMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)MICAI01150UniProtKB/TrEMBL D9TD84Ribonuclease PH
BMicromonospora sp. (strain L5)MICSL01397ncbi logo ADU06961.1
BSalinispora arenicola (strain CNS-205)SALAI00968UniProtKB/Swiss-Prot RNPH_SALAIRibonuclease PH
BSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO01088UniProtKB/Swiss-Prot RNPH_SALTORNAse PH
BVerrucosispora maris (strain AB-18-032)VERMA01167UniProtKB/TrEMBL F4F7D8ribonuclease PH COG0689 RNase PH
BKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)KRIFD01807UniProtKB/TrEMBL D2PPH9Ribonuclease PH
BNocardioides sp. (strain BAA-499 / JS614)NOCSJ01280UniProtKB/Swiss-Prot RNPH_NOCSJRibonuclease PH
BMicrolunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1)MICPN03836UniProtKB/TrEMBL F5XQ63ribonuclease PH protein synonym:RNase PH protein synonym:tRNA nucleotidyltransferase
BPropionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070)PROA402289UniProtKB/TrEMBL K7RUS1tRNA nucleotidyltransferase
BPropionibacterium acnes (strain KPA171202 / DSM 16379)PROAC01640UniProtKB/Swiss-Prot RNPH_PROACRibonuclease PH
BPropionibacterium acnes (strain SK137)PROAS01665UniProtKB/TrEMBL D4H979tRNA nucleotidyltransferase identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BPropionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1)PROFC00752UniProtKB/TrEMBL D7GCM9Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) 3 prime exoribonuclease family, domain 1. This family includes 3 prime-5 prime exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA.
BPropionibacterium propionicum (strain F0230a)PROPF00884UniProtKB/TrEMBL I6XNC6tRNA nucleotidyltransferase
BActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)ACTMD01000UniProtKB/TrEMBL C6WNQ7Ribonuclease PH
BAmycolatopsis mediterranei (strain S699)AMYMS08572UniProtKB/TrEMBL G0G418ribonuclease PH
BAmycolatopsis mediterranei (strain U-32)AMYMU07565ncbi logo ADJ49412.1ribonuclease PH
BPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)PSEUX01447UniProtKB/TrEMBL F4CU39Ribonuclease PH KEGG: sen:SACE_1212 ribonuclease PH; manually curated; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; HAMAP: Ribonuclease phosphorolytic, bacterial-type
BSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)SACVD02795UniProtKB/TrEMBL C7MWC0RNAse PH
BSaccharopolyspora erythraea (strain NRRL 23338)SACEN01173UniProtKB/Swiss-Prot RNPH_SACENRibonuclease PH
BSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)SACES01172UniProtKB/TrEMBL K0JRT7Ribonuclease PH
BThermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51)THEBD00929UniProtKB/TrEMBL D6Y771ribonuclease PH KEGG: ilo:IL2425 RNase PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BKitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)KITSK02659UniProtKB/TrEMBL E4NBP7putative ribonuclease PH protein synonym:RNase PH protein synonym:tRNA nucleotidyltransferase
BStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)STRAW05168UniProtKB/Swiss-Prot RNPH_STRAWRibonuclease PH
BStreptomyces bingchenggensis (strain BCW-1)STRBB06682UniProtKB/TrEMBL D7BXR0Ribonuclease PH
BStreptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)STREN03101UniProtKB/TrEMBL G8WTV4putative ribonuclease
BStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)STRCO02175UniProtKB/Swiss-Prot RNPH_STRCOputative ribonuclease PH SCE19A.04c, rph, probable ribonuclease PH, len: 245 aa; highly similar to many e.g. SW:RNPH_ECOLI (EMBL:X00781), rph, Escherichia coli ribonuclease PH (238 aa), fasta scores; opt: 916 z-score: 1116.8 E(): 0, 60.8% identity in 240 aa overlap. Contains Pfam match to entry PF01138 RNase_PH, 3' exoribonuclease family and PS01277 Ribonuclease PH signature
BStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG04511UniProtKB/Swiss-Prot RNPH_STRGGPutative ribonuclease PH
BStreptomyces hygroscopicus subsp. jinggangensis (strain 5008)STRHJ04308UniProtKB/TrEMBL H2JNI4ribonuclease PH
BStreptomyces pratensis (strain ATCC 33331 / IAF-45CD)STRFA03913UniProtKB/TrEMBL E8W6Q2ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: sgr:SGR_4638 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BStreptomyces scabies (strain 87.22)STRSW05427UniProtKB/TrEMBL C9Z2I8Putative ribonuclease
BStreptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)STRVP02651UniProtKB/TrEMBL F2R4S1Ribonuclease PH
BNocardiopsis alba (strain ATCC BAA-2165 / BE74)NOCAA03193UniProtKB/TrEMBL J7LDZ4ribonuclease PH
BNocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)NOCDD00380UniProtKB/TrEMBL D7AVH2ribonuclease PH COGs: COG0689 RNase PH; InterProIPR018336:IPR020568:IPR015847:IPR002381:IPR 001247; KEGG: tfu:Tfu_2365 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: C1YH23 RNAse PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BThermobifida fusca (strain YX)THEFY02356UniProtKB/TrEMBL Q47MC4RNAse PH
BStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)STRRD01661UniProtKB/TrEMBL D2AT49tRNA nucleotidyltransferase
BThermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081)THECD03783UniProtKB/TrEMBL D1AD85Ribonuclease PH
BBifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8)BIFAR00291UniProtKB/TrEMBL I1W8E0ribonuclease PH COG0689 RNase PH
BBifidobacterium animalis subsp. lactis (strain AD011)BIFA000267UniProtKB/TrEMBL B8DVS5Ribonuclease PH
BBifidobacterium animalis subsp. lactis (strain BB-12)BIFAB00806UniProtKB/TrEMBL D3R3J0Ribonuclease PH
BBifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219)BIFLB00278ncbi logo ACS45677.1Ribonuclease PH
BBifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314)BIFAS00278ncbi logo ACS47244.1Ribonuclease PH
BBifidobacterium animalis subsp. lactis (strain V9)BIFAV00278ncbi logo ADG32867.1Ribonuclease PH
BBifidobacterium asteroides (strain PRL2011)BIFAP00340UniProtKB/TrEMBL K4IK52ribonuclease PH
BBifidobacterium bifidum (strain PRL2010)BIFBP00322ncbi logo ADP35470.1Rph Ribonuclease PH
BBifidobacterium bifidum (strain S17)BIFBS00360UniProtKB/TrEMBL E3EPM8Ribonuclease PH
BBifidobacterium breve (strain ACS-071-V-Sch8b)BIFBA00378UniProtKB/TrEMBL F6C7G5tRNA nucleotidyltransferase
BBifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)BIFDB00310UniProtKB/TrEMBL D2Q874Rph Ribonuclease PH
BBifidobacterium longum (strain DJO10A)BIFLD01014UniProtKB/TrEMBL B3DTK8RNase PH
BBifidobacterium longum (strain NCC 2705)BIFLO00929UniProtKB/Swiss-Prot RNPH_BIFLORibonuclease PH
BBifidobacterium longum subsp. infantis (strain 157F)BIFL100318UniProtKB/TrEMBL E8MRS5putative ribonuclease PH
BBifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12)BIFLS00082UniProtKB/TrEMBL B7GN26ribonuclease PH KEGG: blo:BL0286 probable ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease
BBifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)BIFL200326UniProtKB/TrEMBL E8MGU6putative ribonuclease PH
BBifidobacterium longum subsp. longum (strain BBMN68)BIFLM01024ncbi logo ADQ02012.1Rph RNase PH
BBifidobacterium longum subsp. longum (strain JDM301)BIFLJ00365UniProtKB/TrEMBL D6ZY71Ribonuclease PH pmp logo
BGardnerella vaginalis (strain 409-05)GARV400319UniProtKB/TrEMBL D2R9V8tRNA nucleotidyltransferase
BGardnerella vaginalis (strain ATCC 14019 / 317)GARV300393UniProtKB/TrEMBL E3D8T5tRNA nucleotidyltransferase COG: COG0689; Pfam: PF01138,PF03725; InterPro: IPR002381
BGardnerella vaginalis (strain HMP9231)GARVH01078UniProtKB/TrEMBL F6A327tRNA nucleotidyltransferase
BAtopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546)ATOPD00161UniProtKB/TrEMBL C8W913Ribonuclease PH
BCoriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2)CORGP01372UniProtKB/TrEMBL F2NAP7RNAse PH COGs: COG0689 RNase PH; InterPro IPR018336:IPR002381:IPR001247:IPR015847; KEGG: apv:Apar_0165 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; IMG reference gene:2503576219; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BOlsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C)OLSUV01639UniProtKB/TrEMBL E1QXC1RNAse PH COGs: COG0689 RNase PH; InterProIPR001247:IPR015847:IPR020568:IPR002381:IPR 018336; KEGG: apv:Apar_0165 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: C8W913 Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSlackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1)SLAHD00871UniProtKB/TrEMBL C7N4X1RNAse PH
BConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)CONWI01854UniProtKB/TrEMBL D3F312ribonuclease PH KEGG: azo:azo3963 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BAquifex aeolicus (strain VF5)AQUAE00645UniProtKB/Swiss-Prot RNPH_AQUAERibonuclease PH
BHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)HYDTT00177UniProtKB/TrEMBL D3DFP2Ribonuclease PH
BHydrogenobaculum sp. (strain Y04AAS1)HYDS000851UniProtKB/Swiss-Prot RNPH_HYDS0Ribonuclease PH
BThermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12)THEAH01284UniProtKB/TrEMBL D3SME3Ribonuclease PH
BDesulfurobacterium thermolithotrophum (strain DSM 11699 / BSA)DESTD00013UniProtKB/TrEMBL F0S0E6Ribonuclease PH COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR001247: IPR015847: IPR002381; KEGG: aoe:Clos_0557 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Nucleoside-triphosphatase; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BThermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1)THEA100133UniProtKB/TrEMBL E8T3H6ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: tjr:TherJR_2567 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPersephonella marina (strain DSM 14350 / EX-H1)PERMH00256UniProtKB/Swiss-Prot RNPH_PERMHRibonuclease PH
BSulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825)SULAA00317UniProtKB/TrEMBL C1DT85Ribonuclease PH
BSulfurihydrogenibium sp. (strain YO3AOP1)SULSY00506UniProtKB/Swiss-Prot RNPH_SULSYRibonuclease PH
BCaldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1)CALAS01366UniProtKB/TrEMBL I0I2C9ribonuclease PH
BChloroflexus aggregans (strain MD-66 / DSM 9485)CHLAD03534UniProtKB/TrEMBL B8GAB7Ribonuclease PH
BChloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)CHLAA00240UniProtKB/TrEMBL A9WCA5Ribonuclease PH
BChloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)CHLSY00251ncbi logo ACM51699.1Ribonuclease PH
BRoseiflexus castenholzii (strain DSM 13941 / HLO8)ROSCS03825UniProtKB/TrEMBL A7NQX4ribonuclease PH KEGG: rrs:RoseRS_2001 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BRoseiflexus sp. (strain RS-1)ROSS101928UniProtKB/TrEMBL A5UUT4Ribonuclease PH
BDehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1)DEHMB01072UniProtKB/Swiss-Prot RNPH_DEHMBRNAse PH TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease
BDehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)DEHM101168UniProtKB/Swiss-Prot RNPH_DEHM1ribonuclease PH identified by similarity to SP:P28619; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BDehalococcoides mccartyi (strain CBDB1)DEHMC01017UniProtKB/Swiss-Prot RNPH_DEHMCribonuclease PH
BDehalococcoides mccartyi (strain GT)DEHMG00977ncbi logo ADC74386.1ribonuclease PH KEGG: det:DET1289 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BDehalococcoides mccartyi (strain VS)DEHMV01001UniProtKB/TrEMBL D2BIN9ribonuclease PH
BDehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9)DEHLB00268UniProtKB/TrEMBL D8K3V0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: deg:DehalGT_1026 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSphaerobacter thermophilus (strain DSM 20745 / S 6022)SPHTD00421UniProtKB/TrEMBL D1C7N2Ribonuclease PH
BThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)THERP00422UniProtKB/TrEMBL B9KY88Ribonuclease PH
BDesulfurispirillum indicum (strain ATCC BAA-1389 / S5)DESIS00533UniProtKB/TrEMBL E6W0P1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: mei:Msip34_0047 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BAnabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT02616UniProtKB/Swiss-Prot RNPH_ANAVTRNAse PH
BNostoc punctiforme (strain ATCC 29133 / PCC 73102)NOSP702225UniProtKB/Swiss-Prot RNPH_NOSP7Ribonuclease PH
BNostoc sp. (strain ATCC 29411 / PCC 7524)NOSS700442UniProtKB/TrEMBL K9QNM3ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BNostoc sp. (strain PCC 7120 / UTEX 2576)NOSS100067UniProtKB/Swiss-Prot RNPH_NOSS1Ribonuclease PH
BNostoc azollae (strain 0708)NOSA001057UniProtKB/TrEMBL D7E4G9Ribonuclease PH
BAcaryochloris marina (strain MBIC 11017)ACAM102682UniProtKB/Swiss-Prot RNPH_ACAM1Ribonuclease PH
BCyanobium gracile (strain ATCC 27147 / PCC 6307)CYAGP01940UniProtKB/TrEMBL K9P881ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BCyanothece sp. (strain ATCC 51142)CYAA504454UniProtKB/Swiss-Prot RNPH_CYAA5Ribonuclease PH
BCyanothece sp. (strain PCC 7424)CYAP702937UniProtKB/Swiss-Prot RNPH_CYAP7Ribonuclease PH
BCyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP404716UniProtKB/Swiss-Prot RNPH_CYAP4Ribonuclease PH
BSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)SYNP600476UniProtKB/Swiss-Prot RNPH_SYNP6hypothetical protein
BSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP202044UniProtKB/TrEMBL B1XI78Ribonuclease PH
BSynechococcus sp. (strain CC9311)SYNS300312UniProtKB/TrEMBL Q0IDC1Ribonuclease PH
BSynechococcus sp. (strain CC9605)SYNSC00263UniProtKB/Swiss-Prot RNPH_SYNSCribonuclease PH
BSynechococcus sp. (strain CC9902)SYNS902054UniProtKB/TrEMBL Q3AUQ5RNAse PH
BSynechococcus sp. (strain JA-2-3B'a(2-13))SYNJB01678UniProtKB/Swiss-Prot RNPH_SYNJBribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BSynechococcus sp. (strain JA-3-3Ab)SYNJA02498UniProtKB/Swiss-Prot RNPH_SYNJAribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BSynechococcus sp. (strain WH7803)SYNPW00320UniProtKB/TrEMBL A5GII1Ribonuclease PH
BSynechococcus sp. (strain WH8102)SYNPX00276UniProtKB/Swiss-Prot RNPH_SYNPXRibonuclease PH
BThermosynechococcus elongatus (strain BP-1)THEEB00575UniProtKB/Swiss-Prot RNPH_THEEBRibonuclease PH
BLyngbya sp. (strain PCC 8106)LYNSP05591UniProtKB/TrEMBL A0YYX6ribonuclease PH COG0689 RNase PH
BTrichodesmium erythraeum (strain IMS101)TRIEI01747UniProtKB/TrEMBL Q113J5Ribonuclease PH
BStanieria cyanosphaera (strain ATCC 29371 / PCC 7437)STAC701621UniProtKB/TrEMBL K9XUA4RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR001247:IPR015847:IPR002381; KEGG: ter:Tery_2089 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type
BProchlorococcus marinus (strain MIT 9303)PROM302418UniProtKB/TrEMBL A2CCH6Ribonuclease PH
BProchlorococcus marinus (strain MIT 9313)PROMM02353UniProtKB/Swiss-Prot RNPH_PROMMribonuclease PH Alternative locus ID:P9313_23151
BCalditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1)CALNY00572UniProtKB/TrEMBL E4TFM7Ribonuclease PH
BDeferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1)DEFDS00431UniProtKB/TrEMBL D3PBG7Ribonuclease PH
BDenitrovibrio acetiphilus (strain DSM 12809 / N2460)DENA200055UniProtKB/TrEMBL D4H1B4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ilo:IL2425 RNase PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BFlexistipes sinusarabici (strain DSM 4947 / MAS 10)FLESM01764UniProtKB/TrEMBL F8E3W7Ribonuclease PH
BDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV02439UniProtKB/TrEMBL C1CZJ0Putative tRNA nucleotidyltransferase
BDeinococcus geothermalis (strain DSM 11300)DEIGD02059UniProtKB/TrEMBL Q1IWK4ribonuclease PH KEGG: dra:DR1585 ribonuclease PH, ev=1e-107, 80% identity TIGRFAM: ribonuclease PH: (8.2e-53) PFAM: 3' exoribonuclease: (6.4e-27)
BDeinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0)DEIGI00433UniProtKB/TrEMBL H8GVI3Ribonuclease PH
BDeinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34)DEIML02388UniProtKB/TrEMBL E8UAG5ribonuclease PH COGs: COG0689 RNase PH; InterPro IPR001247: IPR015847: IPR002381; KEGG: dge:Dgeo_2086 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDeinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200)DEIPD03245UniProtKB/TrEMBL L0A4T6ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)DEIRA01544UniProtKB/Swiss-Prot RNPH_DEIRARibonuclease PH
BTruepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)TRURR00473UniProtKB/TrEMBL D7CS85ribonuclease PH COGs: COG0689 RNase PH; InterPro IPR001247:IPR015847:IPR020568:IPR002381; KEGG: dge:Dgeo_2086 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Q1IWK4 Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21)MEIRD01067UniProtKB/TrEMBL D3PQY7Ribonuclease PH
BMeiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2)MEISD01099UniProtKB/TrEMBL D7BDS4Ribonuclease PH
BOceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506)OCEP501899UniProtKB/TrEMBL E4U515RNAse PH COGs: COG0689 RNase PH; InterPro IPR018336: IPR002381: IPR001247: IPR015847; KEGG: mrb:Mrub_1106 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; TIGRFAM: ribonuclease PH
BDictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT601165UniProtKB/Swiss-Prot RNPH_DICT6Ribonuclease PH
BDictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD01270UniProtKB/Swiss-Prot RNPH_DICTDRibonuclease PH
BFibrobacter succinogenes (strain ATCC 19169 / S85)FIBSS00624UniProtKB/TrEMBL C9RM77Ribonuclease PH
BAmphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01)AMPXN00978UniProtKB/TrEMBL K0IXF4ribonuclease PH protein synonym:RNase PH protein synonym:tRNA nucleotidyltransferase
BAnoxybacillus flavithermus (strain DSM 21510 / WK1)ANOFW00582UniProtKB/Swiss-Prot RNPH_ANOFWRibonuclease PH
BBacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)BACAS02622UniProtKB/TrEMBL E1UMI3ribonuclease PH
BBacillus amyloliquefaciens (strain FZB42)BACA202453UniProtKB/Swiss-Prot RNPH_BACA2Rph
BBacillus anthracisBACAN04260UniProtKB/Swiss-Prot RNPH_BACANRibonuclease PH pmp logo
BBacillus anthracis (strain A0248)BACAA04107UniProtKB/Swiss-Prot RNPH_BACAARibonuclease PH
BBacillus anthracis (strain CDC 684 / NRRL 3495)BACAC04578UniProtKB/Swiss-Prot RNPH_BACACRibonuclease PH
BBacillus atrophaeus (strain 1942)BACA102361ncbi logo ADP33321.1ribonuclease PH COG0689 RNase PH
BBacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4)BACCJ03085UniProtKB/TrEMBL E6TZT3ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: bpf:BpOF4_03065 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BBacillus cereus (strain 03BB102)BACC304389UniProtKB/Swiss-Prot RNPH_BACC3Ribonuclease PH
BBacillus cereus (strain AH187)BACC704392UniProtKB/Swiss-Prot RNPH_BACC7Ribonuclease PH
BBacillus cereus (strain AH820)BACC004467UniProtKB/Swiss-Prot RNPH_BACC0Ribonuclease PH
BBacillus cereus (strain ATCC 10987)BACC104534UniProtKB/Swiss-Prot RNPH_BACC1ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725
BBacillus cereus (strain ATCC 14579 / DSM 31)BACCR04284UniProtKB/Swiss-Prot RNPH_BACCRRibonuclease PH
BBacillus cereus (strain B4264)BACC404421UniProtKB/Swiss-Prot RNPH_BACC4Ribonuclease PH
BBacillus cereus (strain G9842)BACC204494UniProtKB/Swiss-Prot RNPH_BACC2Ribonuclease PH
BBacillus cereus (strain Q1)BACCQ04159UniProtKB/Swiss-Prot RNPH_BACCQRibonuclease PH
BBacillus cereus (strain ZK / E33L)BACCZ04193UniProtKB/Swiss-Prot RNPH_BACCZribonuclease PH (RNase PH) (tRNA nucleotidyltransferase)
BBacillus cereus var. anthracis (strain CI)BACAI04215UniProtKB/TrEMBL D8GX96ribonuclease PH pmp logo
BBacillus clausii (strain KSM-K16)BACSK02639UniProtKB/Swiss-Prot RNPH_BACSKribonuclease PH
BBacillus cereus subsp. cytotoxis (strain NVH 391-98)BACCN03044UniProtKB/Swiss-Prot RNPH_BACCNRibonuclease PH
BBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)BACHD03015UniProtKB/Swiss-Prot RNPH_BACHDRibonuclease PH
BBacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD03096UniProtKB/Swiss-Prot RNPH_BACLDribonuclease PH
BBacillus megaterium (strain ATCC 12872 / QMB1551)BACMQ04574UniProtKB/TrEMBL D5DTN0ribonuclease PH
BBacillus megaterium (strain DSM 319)BACMD04570UniProtKB/TrEMBL D5DLN7ribonuclease PH
BBacillus pumilus (strain SAFR-032)BACP202446UniProtKB/Swiss-Prot RNPH_BACP2tRNA nucleotidyltransferase
BBacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10)BACIE01358UniProtKB/TrEMBL D6XSY7ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: azo:azo3963 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BBacillus subtilis (strain BSn5)BACST00993ncbi logo ADV93630.1ribonuclease PH COG0689 RNase PH
BBacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23)BACPZ02722UniProtKB/TrEMBL E0TVB8ribonuclease PH
BBacillus subtilis subsp. spizizenii (strain TU-B-10)BACPT02842UniProtKB/TrEMBL G4NYQ8ribonuclease PH pmp logo
BBacillus subtilis (strain 168)BACSU02949UniProtKB/Swiss-Prot RNPH_BACSUribonuclease PH Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 1624460, 19153445; Product type e: enzyme
BBacillus thuringiensis (strain Al Hakam)BACAH03862UniProtKB/TrEMBL A0RJ97ribonuclease PH
BBacillus thuringiensis subsp. finitimus (strain YBT-020)BACT004375UniProtKB/TrEMBL F0PZ26ribonuclease PH COG0689 RNase PH pmp logo
BBacillus thuringiensis subsp. konkukian (strain 97-27)BACHK04151UniProtKB/Swiss-Prot RNPH_BACHKRibonuclease PH
BBacillus thuringiensis (strain BMB171)BACT104106UniProtKB/TrEMBL D5TYN9ribonuclease PH pmp logo
BBacillus weihenstephanensis (strain KBAB4)BACWK04215UniProtKB/Swiss-Prot RNPH_BACWKRibonuclease PH
BGeobacillus kaustophilus (strain HTA426)GEOKA02641UniProtKB/Swiss-Prot RNPH_GEOKAribonuclease PH
BGeobacillus sp. (strain WCH70)GEOSW02254UniProtKB/Swiss-Prot RNPH_GEOSWRibonuclease PH
BGeobacillus sp. (strain Y4.1MC1)GEOS000847UniProtKB/TrEMBL A0A0F6BJW8ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: gwc:GWCH70_2600 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGeobacillus sp. (strain Y412MC61)GEOSY00806ncbi logo ACX77518.1Ribonuclease PH
BGeobacillus thermodenitrificans (strain NG80-2)GEOTN02531UniProtKB/Swiss-Prot RNPH_GEOTNRibonuclease PH
BGeobacillus thermoglucosidasius (strain C56-YS93)GEOTC00868ncbi logo AEH46973.1Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: gmc:GY4MC1_0905 ribonuclease PH
BOceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)OCEIH02100UniProtKB/Swiss-Prot RNPH_OCEIHribonuclease PH (tRNA nucleotidyltransferase) CDS_ID OB2106
BExiguobacterium antarcticum (strain B7)EXIAB01939UniProtKB/TrEMBL K0AE11Ribonuclease PH
BExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS202107UniProtKB/Swiss-Prot RNPH_EXIS2Ribonuclease PH
BExiguobacterium sp. (strain ATCC BAA-1283 / AT1b)EXISA02614UniProtKB/TrEMBL C4L4I6Ribonuclease PH
BListeria innocua serovar 6a (strain CLIP 11262)LISIN01197UniProtKB/Swiss-Prot RNPH_LISINRibonuclease PH
BListeria ivanovii (strain ATCC BAA-678 / PAM 55)LISIP01183UniProtKB/TrEMBL G2ZF60Putative ribonuclease PH Similar to ribonuclease PH
BListeria monocytogenes serotype 1/2a (strain 08-5923)LISM201257ncbi logo ADB71106.1ribonuclease PH
BListeria monocytogenes serotype 1/2a (strain 10403S)LISM401200ncbi logo AEO06221.1ribonuclease PH
BListeria monocytogenes serotype 4a (strain HCC23)LISMH01390UniProtKB/Swiss-Prot RNPH_LISMHRibonuclease PH
BListeria monocytogenes serotype 4a (strain L99)LISML01220ncbi logo CAR83922.1Ribonuclease PH
BListeria monocytogenes serotype 4b (strain CLIP80459)LISMC01219UniProtKB/Swiss-Prot RNPH_LISMCPutative ribonuclease PH
BListeria monocytogenes serotype 4b (strain F2365)LISMF01232UniProtKB/Swiss-Prot RNPH_LISMFribonuclease PH identified by similarity to SP:P28619; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)LISMO01233UniProtKB/Swiss-Prot RNPH_LISMORibonuclease PH
BListeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954)LISSS01120ncbi logo CBH27271.1ribonuclease PH
BListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)LISW601193UniProtKB/Swiss-Prot RNPH_LISW6Rph protein
BBrevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)BREBN01787UniProtKB/Swiss-Prot RNPH_BREBNRibonuclease PH
BGeobacillus sp. (strain Y412MC10)GEOS401467UniProtKB/TrEMBL D3EKK7ribonuclease PH KEGG: pjd:Pjdr2_4458 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPaenibacillus mucilaginosus (strain KNP414)PAEMK06336UniProtKB/TrEMBL F8FNU7Rph Ribonuclease PH
BPaenibacillus polymyxa (strain E681)PAEP603621UniProtKB/TrEMBL E0RA52Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) COGMatches:COG0689; PfamMatches:PF01138, PF03725; PrositeMatches:PS01277; go_process: RNA processing (GO:0006396)
BPaenibacillus polymyxa (strain SC2)PAEPS04180UniProtKB/TrEMBL E3E5V6Ribonuclease PH
BPaenibacillus sp. (strain JDR-2)PAESJ04396UniProtKB/TrEMBL C6D899Ribonuclease PH
BPaenibacillus terrae (strain HPL-003)PAETH00116UniProtKB/TrEMBL G7VUA5ribonuclease ph:ham1 COG0689 RNase PH
BThermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4)THECK02397UniProtKB/TrEMBL L0EHQ9ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSolibacillus silvestris (strain StLB046)SOLSS01261UniProtKB/TrEMBL F2FA24RNase PH
BAlkaliphilus metalliredigens (strain QYMF)ALKMQ00873UniProtKB/TrEMBL A6TLV8Ribonuclease PH
BAlkaliphilus oremlandii (strain OhILAs)ALKOO00546UniProtKB/TrEMBL A8MLK5Ribonuclease PH
BClostridium botulinum (strain Eklund 17B / Type B)CLOBB00386UniProtKB/Swiss-Prot RNPH_CLOBBRibonuclease PH
BClostridium botulinum (strain Alaska E43 / Type E3)CLOBA00370UniProtKB/Swiss-Prot RNPH_CLOBARibonuclease PH
BClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE01293UniProtKB/Swiss-Prot RNPH_CLOCEribonuclease PH TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; KEGG: cth:Cthe_0188 ribonuclease PH
BClostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45)CLOCD01099UniProtKB/TrEMBL G8LYZ0ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BClostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)CLOK503301UniProtKB/Swiss-Prot RNPH_CLOK5RpH
BClostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC)CLOLD03569UniProtKB/TrEMBL D8GTB3ribonuclease PH
BClostridium perfringens (strain 13 / Type A)CLOPE02254UniProtKB/Swiss-Prot RNPH_CLOPERibonuclease PH
BClostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)CLOP102449UniProtKB/Swiss-Prot RNPH_CLOP1ribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BClostridium perfringens (strain SM101 / Type A)CLOPS02154UniProtKB/Swiss-Prot RNPH_CLOPSribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BClostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH00183UniProtKB/TrEMBL A3DBV0Ribonuclease PH
BClostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8)CLOTL01962ncbi logo ADU75086.1ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; manually curated; KEGG: ate:Athe_0837 ribonuclease PH; TIGRFAM: ribonuclease PH
BSulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL)SULAD00667UniProtKB/TrEMBL G8U128RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR002381:IPR001247:IPR015847; KEGG: dno:DNO_0664 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type
BSulfobacillus acidophilus (strain TPY)SULAT01460UniProtKB/TrEMBL F8I561ribonuclease PH
BSymbiobacterium thermophilum (strain T / IAM 14863)SYMTH00340UniProtKB/Swiss-Prot RNPH_SYMTHRibonuclease PH
BAcetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655)ACEWD00292UniProtKB/TrEMBL H6LGH4ribonuclease PH
BEubacterium limosum (strain KIST612)EUBLK00931UniProtKB/TrEMBL E3GJP9ribonuclease PH
BHeliobacterium modesticaldum (strain ATCC 51547 / Ice1)HELMI00288UniProtKB/TrEMBL B0TFI3Ribonuclease ph
BDesulforudis audaxviator (strain MP104C)DESAP01425UniProtKB/Swiss-Prot RNPH_DESAPRibonuclease PH
BDesulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1)DESDL02878UniProtKB/TrEMBL L0F9M8RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2
BDesulfitobacterium hafniense (strain DCB-2 / DSM 10664)DESHD04292UniProtKB/TrEMBL B8FVJ2Ribonuclease PH
BDesulfitobacterium hafniense (strain Y51)DESHY03187UniProtKB/TrEMBL Q24SI1hypothetical protein similarity to COG0689 RNase PH(Evalue: 1E-82)
BDesulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4)DESAJ04046UniProtKB/TrEMBL I4DBM8ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10)DESMD03935UniProtKB/TrEMBL J7IW33RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644)DESAS03324UniProtKB/TrEMBL C8VW47Ribonuclease PH
BDesulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB)DESCC00583UniProtKB/TrEMBL F6B854Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: drm:Dred_2684 ribonuclease PH
BDesulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17)DESK700348UniProtKB/TrEMBL F6CP62Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: pth:PTH_0791 ribonuclease PH
BDesulfotomaculum reducens (strain MI-1)DESRM02580UniProtKB/Swiss-Prot RNPH_DESRMRibonuclease PH
BDesulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL)DESRL00882UniProtKB/TrEMBL F6DJZ4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: drm:Dred_2684 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)PELTS00782UniProtKB/TrEMBL A5D466RNase PH
BSyntrophobotulus glycolicus (strain DSM 8271 / FlGlyR)SYNGF02417UniProtKB/TrEMBL F0SWL1RNAse PH COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR002381: IPR001247: IPR015847; KEGG: dsy:DSY3222 hypothetical protein; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BThermincola potens (strain JR)THEPJ02466UniProtKB/TrEMBL D5XBH5ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: pth:PTH_0791 RNase PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)SYNWW00420UniProtKB/Swiss-Prot RNPH_SYNWWTRNA nucleotidyltransferase
BSyntrophothermus lipocalidus (strain DSM 12680 / TGB-C1)SYNLT01987UniProtKB/TrEMBL D7CIR9Ribonuclease PH
BClostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a)CLOA900320UniProtKB/TrEMBL K0AYF9Ribonuclease PH
BHalanaerobium hydrogeniformansHALHG00795UniProtKB/TrEMBL E4RPV4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: hor:Hore_15390 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BHalanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL)HALPG00606UniProtKB/TrEMBL E3DQ19RNAse PH COGs: COG0689 RNase PH; InterPro IPR018336:IPR002381:IPR001247:IPR015847; KEGG: hor:Hore_15390 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)HALOH01508UniProtKB/TrEMBL B8CYB9Ribonuclease PH
BAcetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288)ACEAZ00488UniProtKB/TrEMBL D9QUY2RNAse PH COGs: COG0689 RNase PH; InterProIPR018336:IPR020568:IPR015847:IPR002381:IPR 001247; KEGG: hor:Hore_15390 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: B8CYB9 Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BHalobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1)HALHC01878UniProtKB/TrEMBL L0KAA2ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BNatranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)NATTJ01878UniProtKB/TrEMBL B2A6I8RNAse PH
BThermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)THETN00557UniProtKB/Swiss-Prot Q8RC30Ribonuclease PH
BCarboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)CARHZ00312UniProtKB/Swiss-Prot RNPH_CARHZribonuclease PH identified by similarity to SP:P28619; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BMoorella thermoacetica (strain ATCC 39073)MOOTA00502UniProtKB/Swiss-Prot RNPH_MOOTAribonuclease PH
BTepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1)TEPAE00719UniProtKB/TrEMBL F4LVU2ribonuclease PH Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1624460, 19153445; Product type e : enzyme
BThermoanaerobacter italicus (strain DSM 9252 / Ab9)THEIA00561UniProtKB/TrEMBL D3T7G5Ribonuclease PH
BThermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3)THEM300619UniProtKB/TrEMBL D7ATG1Ribonuclease PH
BThermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)THEP301602UniProtKB/Swiss-Prot RNPH_THEP3Ribonuclease PH
BThermoanaerobacter sp. (strain X513)THESX00559ncbi logo ADN54251.1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: tpd:Teth39_1683 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BThermoanaerobacter sp. (strain X514)THEPX00521UniProtKB/Swiss-Prot RNPH_THEPXRibonuclease PH
BCaldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)CALBD00777UniProtKB/Swiss-Prot RNPH_CALBDribonuclease PH KEGG: csc:Csac_0985 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCaldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108)CALH101772UniProtKB/TrEMBL E4QDE0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ate:Athe_0837 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCaldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B)CALKI01742UniProtKB/TrEMBL E4S486ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ate:Athe_0837 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCaldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)CALK201736UniProtKB/TrEMBL E4SFY7ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ate:Athe_0837 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCaldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47)CALOO00701UniProtKB/TrEMBL D9TJA4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ate:Athe_0837 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCaldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL)CALOW00634UniProtKB/TrEMBL E4Q593Ribonuclease PH
BCaldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)CALS800901UniProtKB/Swiss-Prot RNPH_CALS8Ribonuclease PH
BThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)THESW02503UniProtKB/TrEMBL I3VYF2Ribonuclease PH TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: txy:Thexy_0742 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2
BThermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814)THETC01943UniProtKB/TrEMBL D9TQM1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: tpd:Teth39_1683 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BThermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)THEXL00711UniProtKB/TrEMBL F6BIP5Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: ttm:Tthe_2078 ribonuclease PH
BThermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P)THEOJ01682UniProtKB/TrEMBL D9RYU3RNAse PH COGs: COG0689 RNase PH; InterPro IPR002381:IPR001247:IPR015847:IPR018336; KEGG: tte:TTE0618 RNase PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BMahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON)MAHA500880UniProtKB/TrEMBL F4A1Z5ribonuclease PH COGs: COG0689 RNase PH; InterPro IPR002381: IPR001247: IPR015847: IPR018336; KEGG: cdl:CDR20291_3169 ribonuclease Ph; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH/Ham1 protein; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSelenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421)SELRL00494UniProtKB/TrEMBL I0GN79putative ribonuclease PH protein synonym:tRNA nucleotidyltransferase
BVeillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3)VEIPT00430UniProtKB/TrEMBL D1BL62ribonuclease PH TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; KEGG: azo:azo3963 ribonuclease PH
BIlyobacter polytropus (strain DSM 2926 / CuHBu1)ILYPC01090UniProtKB/TrEMBL E3H7J4ribonuclease PH COGs: COG0689 RNase PH; InterProIPR018336:IPR002381:IPR020568:IPR015847:IPR 001247; KEGG: fnu:FN1851 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: C3WCU6 Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BLeptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249)LEPBD01320UniProtKB/TrEMBL C7NAS8Ribonuclease PH
BSebaldella termitidis (strain ATCC 33386 / NCTC 11300)SEBTE02266UniProtKB/TrEMBL D1AL37ribonuclease PH KEGG: hap:HAPS_1298 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BStreptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901)STRM900565UniProtKB/TrEMBL D1AXP7ribonuclease PH KEGG: hap:HAPS_1298 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)GEMAT01568UniProtKB/TrEMBL C1A8Q3ribonuclease PH protein synonym: RNase PH protein synonym: tRNA nucleotidyltransferase
BLeptospirillum ferrooxidans (strain C2-3)LEPFC01941UniProtKB/TrEMBL I0IQY1ribonuclease PH
BLeptospirillum ferriphilum (strain ML-04)LEPFM02126UniProtKB/TrEMBL J9ZE44Rnase
BThermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)THEYD01330UniProtKB/Swiss-Prot RNPH_THEYDRibonuclease PH
BPhycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)PHYMF01567UniProtKB/TrEMBL I0IEP6ribonuclease PH protein synonym:tRNA nucleotidyltransferase
BIsosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B)ISOPI03380UniProtKB/TrEMBL E8R6S6RNAse PH COGs: COG0689 RNase PH; InterPro IPR002381: IPR001247: IPR015847: IPR018336; KEGG: bac:BamMC406_0869 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BPirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128)PIRSD02647UniProtKB/TrEMBL D2R6P9ribonuclease PH KEGG: afr:AFE_2343 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)PLAL202715UniProtKB/TrEMBL D5SR75
BRhodopirellula baltica (strain SH1)RHOBA06507UniProtKB/Swiss-Prot RNPH_RHOBAribonuclease PH PMID: 1624460 best DB hits: BLAST: swissprot:P28619; RNPH_BACSU RIBONUCLEASE PH (RNASE PH) (TRNA; E=2e-60 pir:A44914; tRNA nucleotidyltransferase (EC 2.7.7.56) - Bacillus; E=4e-60 pir:D82350; ribonuclease PH VC0210 [imported] - Vibrio cholerae; E=7e-60 COG: BS_rph; COG0689 RNase PH; E=2e-61 PA4740; COG1185 Polyribonucleotide nucleotidyltransferase; E=0.001 PFAM: PF01138; 3' exoribonuclease family; E=4.3e-59
BSingulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)SINAD02430UniProtKB/TrEMBL L0DDL8ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BAsticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)ASTEC00050UniProtKB/TrEMBL E8RMZ1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: pzu:PHZ_c3471 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BBrevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81)BRESC00210UniProtKB/TrEMBL D9QJ01Ribonuclease PH
BCaulobacter crescentus (strain ATCC 19089 / CB15)CAUCR00151UniProtKB/Swiss-Prot RNPH_CAUCRRibonuclease PH
BCaulobacter crescentus (strain NA1000 / CB15N)CAUCN00151UniProtKB/Swiss-Prot RNPH_CAUCNRibonuclease PH
BCaulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059)CAUST03882UniProtKB/TrEMBL D5VPJ6Ribonuclease PH
BCaulobacter sp. (strain K31)CAUSK00166UniProtKB/Swiss-Prot RNPH_CAUSKRibonuclease PH
BPhenylobacterium zucineum (strain HLK1)PHEZH03456UniProtKB/Swiss-Prot RNPH_PHEZHRibonuclease PH
BMagnetococcus sp. (strain MC-1)MAGSM00050ncbi logo ABK42580.1ribonuclease PH KEGG: bpm:BURPS1710b_3051 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)PARBH00735UniProtKB/TrEMBL E0TEN0ribonuclease PH
BBeijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII900766UniProtKB/Swiss-Prot RNPH_BEII9Ribonuclease PH
BMethylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)METSB02102UniProtKB/Swiss-Prot RNPH_METSBRibonuclease PH
BBradyrhizobium japonicum (strain USDA 110)BRAJA00672UniProtKB/Swiss-Prot Q89WK4Ribonuclease PH
BBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB00176UniProtKB/Swiss-Prot RNPH_BRASBRNase PH
BBradyrhizobium sp. (strain ORS278)BRASO00166UniProtKB/Swiss-Prot RNPH_BRASORNase PH
BNitrobacter hamburgensis (strain X14 / DSM 10229)NITHX00148UniProtKB/Swiss-Prot RNPH_NITHXribonuclease PH
BNitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN00190UniProtKB/Swiss-Prot RNPH_NITWNRNAse PH
BOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)OLICO00407UniProtKB/Swiss-Prot RNPH_OLICORibonuclease PH
BOligotropha carboxidovorans (strain OM4)OLICM00116ncbi logo AEI01276.1ribonuclease PH
BRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)RHOPA00330UniProtKB/Swiss-Prot RNPH_RHOPARibonuclease PH
BRhodopseudomonas palustris (strain BisA53)RHOP500350UniProtKB/TrEMBL Q07US2ribonuclease PH KEGG: rpb:RPB_0425 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BRhodopseudomonas palustris (strain BisB18)RHOPB00321UniProtKB/Swiss-Prot RNPH_RHOPBRNAse PH
BRhodopseudomonas palustris (strain BisB5)RHOPS00390UniProtKB/Swiss-Prot RNPH_RHOPSribonuclease PH
BRhodopseudomonas palustris (strain DX-1)RHOPX00295UniProtKB/TrEMBL E6VI44ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: nha:Nham_0151 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BRhodopseudomonas palustris (strain HaA2)RHOP200424UniProtKB/Swiss-Prot RNPH_RHOP2RNAse PH
BRhodopseudomonas palustris (strain TIE-1)RHOPT00330UniProtKB/Swiss-Prot RNPH_RHOPTRibonuclease PH
BBrucella abortus (strain 2308)BRUA200170UniProtKB/Swiss-Prot RNPH_BRUA23' exoribonuclease:Ribonuclease PH
BBrucella abortus (strain S19)BRUA100154UniProtKB/Swiss-Prot RNPH_BRUA1Ribonuclease PH
BBrucella abortus biovar 1 (strain 9-941)BRUAB00157UniProtKB/Swiss-Prot RNPH_BRUABRph, ribonuclease PH similar to BR0173, ribonuclease PH
BBrucella canis (strain ATCC 23365 / NCTC 10854)BRUC200169UniProtKB/Swiss-Prot RNPH_BRUC2Ribonuclease PH
BBrucella melitensis (strain M5-90)BRUM500181ncbi logo ADZ86125.1ribonuclease PH
BBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)BRUME01763UniProtKB/Swiss-Prot RNPH_BRUMERibonuclease PH pmp logo
BBrucella melitensis biotype 2 (strain ATCC 23457)BRUMB00160UniProtKB/Swiss-Prot RNPH_BRUMBRibonuclease PH
BBrucella microti (strain CCM 4915)BRUMC00168UniProtKB/TrEMBL C7LFM9Ribonuclease PH
BBrucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO200152UniProtKB/Swiss-Prot RNPH_BRUO2Ribonuclease PH
BBrucella suis biovar 1 (strain 1330)BRUSU00182UniProtKB/Swiss-Prot RNPH_BRUSUribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BBrucella suis (strain ATCC 23445 / NCTC 10510)BRUSI00162UniProtKB/Swiss-Prot RNPH_BRUSIribonuclease PH GO_function: tRNA-specific ribonuclease activity [GO ID 0004549]; GO_process: tRNA processing [GO ID 0008033]
BOchrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)OCHA400181UniProtKB/Swiss-Prot RNPH_OCHA4Ribonuclease PH
BHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)HYPDA03289UniProtKB/TrEMBL D8JXJ9Ribonuclease PH
BHyphomicrobium sp. (strain MC1)HYPSM04660UniProtKB/TrEMBL F8JEV0ribonuclease PH (tRNA nucleotidyltransferase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512252, 1512253, 1885537, 1925027, 6207018, 8501045, 88263018, 93015723; Product type e : enzyme
BPelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2)PELHB03300UniProtKB/TrEMBL G4R7U4ribonuclease PH
BRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)RHOVT00594UniProtKB/TrEMBL E3HZE5ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: rpb:RPB_0425 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BMethylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1)METEA00296UniProtKB/TrEMBL C5AS34Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512252, 1512253, 1885537, 1925027, 6207018, 8501045, 88263018, 93015723; Product type e : enzyme
BMethylobacterium extorquens (strain CM4 / NCIMB 13688)METC400397UniProtKB/Swiss-Prot RNPH_METC4ribonuclease PH KEGG: mex:Mext_0401 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BMethylobacterium extorquens (strain DSM 5838 / DM4)METED00439UniProtKB/TrEMBL C7C9G1Ribonuclease PH
BMethylobacterium extorquens (strain PA1)METEP00390UniProtKB/Swiss-Prot RNPH_METEPRibonuclease PH
BMethylobacterium nodulans (strain ORS2060 / LMG 21967)METNO04468UniProtKB/Swiss-Prot RNPH_METNORibonuclease PH
BMethylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB00442UniProtKB/Swiss-Prot RNPH_METPBRibonuclease PH
BMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)METRJ02885UniProtKB/Swiss-Prot RNPH_METRJRibonuclease PH
BMethylobacterium sp. (strain 4-46)METS403977UniProtKB/Swiss-Prot RNPH_METS4Ribonuclease PH
BMethylocystis sp. (strain SC2)METSZ03043UniProtKB/TrEMBL J7Q554tRNA nucleotidyltransferase
BChelativorans sp. (strain BNC1)CHESB03976UniProtKB/Swiss-Prot RNPH_CHESBRNAse PH TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; KEGG: bmb:BruAb1_0169 Rph, ribonuclease PH
BMesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073)MESAW00815UniProtKB/TrEMBL L0KDG1ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BMesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271)MESCW00762UniProtKB/TrEMBL E8TFQ7
BRhizobium loti (strain MAFF303099)RHILO03549UniProtKB/Swiss-Prot RNPH_RHILOribonuclease PH
BAgrobacterium sp. (strain H13-3)AGRSH00307UniProtKB/TrEMBL F0L547ribonuclease PH RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; RNase PH
BAgrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT500314UniProtKB/Swiss-Prot Q8UIG8Ribonuclease PH
BAgrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK00458UniProtKB/Swiss-Prot RNPH_AGRRKRibonuclease PH
BAgrobacterium vitis (strain S4 / ATCC BAA-846)AGRVS00307UniProtKB/Swiss-Prot RNPH_AGRVSRibonuclease PH
BLiberibacter asiaticus (strain psy62)LIBAP00569UniProtKB/TrEMBL C6XFF0Ribonuclease PH
BRhizobium etli (strain CFN 42 / ATCC 51251)RHIEC00348UniProtKB/Swiss-Prot RNPH_RHIECribonuclease PH protein similar to rph (SMc01144) [Sinorhizobium meliloti] and rph (Atu0327) [Agrobacterium tumefaciens str. C58]; Similar to entrez-protein:Q92SK2; Putative location:bacterial cytoplasm Psort-Score: 0.4450; GO_function: GO:0016740 - transferase activity; GO_function: GO:0016779 - nucleotidyltransferase activity; GO_function: GO:0003723 - RNA binding; GO_function: GO:0000175 - 3`-5` exoribonuclease activity; GO_function: GO:0000049 - tRNA binding; GO_function: GO:0004549 - tRNA-specific ribonuclease activity; GO_function: GO:0009022 - tRNA nucleotidyltransferase activity; GO_process: GO:0006396 - RNA processing; GO_process: GO:0008033 - tRNA processing
BRhizobium etli (strain CIAT 652)RHIE600393UniProtKB/Swiss-Prot RNPH_RHIE6Ribonuclease PH protein
BRhizobium leguminosarum bv. trifolii (strain WSM1325)RHILS00006UniProtKB/TrEMBL C6AY94Ribonuclease PH
BRhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW00006UniProtKB/Swiss-Prot RNPH_RHILWRibonuclease PH
BRhizobium leguminosarum bv. viciae (strain 3841)RHIL300382UniProtKB/Swiss-Prot RNPH_RHIL3putative ribonuclease similarity:fasta; with=UniProt:RNPH_CAUCR (EMBL:AE005689); Caulobacter crescentus.; rph; Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA nucleotidyltransferase).; length=EC 2.7.7.56; id 64.017; 239 aa overlap; query 1-239; subject 1-238 similarity:fasta; with=UniProt:RNPH_AGRT5 (EMBL:AE007971); Agrobacterium tumefaciens (strain C58/ATCC 33970).; rph; Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA nucleotidyltransferase).; length=EC 2.7.7.56; id 87.764; 237 aa overlap; query 1-237; subject 1-237
BRhizobium fredii (strain HH103)RHIFH00008UniProtKB/TrEMBL G9A9A3ribonuclease PH
BRhizobium sp. (strain NGR234)RHISN00010UniProtKB/Swiss-Prot RNPH_RHISNRibonuclease PH
BRhizobium meliloti (strain 1021)RHIME00371UniProtKB/Swiss-Prot RNPH_RHIMEProbable ribonuclease PH protein
BSinorhizobium meliloti (strain AK83)SINMK00009ncbi logo AEG51784.1Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: smd:Smed_0010 ribonuclease PH
BSinorhizobium meliloti (strain BL225C)SINMB00009UniProtKB/TrEMBL A0A0E0U8J4Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: smd:Smed_0010 ribonuclease PH pmp logo
BSinorhizobium meliloti (strain SM11)SINMM00009UniProtKB/TrEMBL F7X5S9ribonuclease PH RNase PH pmp logo
BSinorhizobium medicae (strain WSM419)SINMW00010UniProtKB/Swiss-Prot RNPH_SINMWRibonuclease PH
BParvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL103498UniProtKB/Swiss-Prot RNPH_PARL1Ribonuclease PH
BAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC504278UniProtKB/Swiss-Prot RNPH_AZOC5Ribonuclease PH
BStarkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)STAND03763UniProtKB/TrEMBL D6ZYY9ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: xau:Xaut_2535 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BXanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP202463UniProtKB/Swiss-Prot RNPH_XANP2Ribonuclease PH
BHirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418)HIRBI03079UniProtKB/TrEMBL C6XIH4Ribonuclease PH
BHyphomonas neptunium (strain ATCC 15444)HYPNA03248UniProtKB/TrEMBL Q0BX05Ribonuclease PH
BMaricaulis maris (strain MCS10)MARMM02988UniProtKB/Swiss-Prot RNPH_MARMMRibonuclease PH
BDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)DINSH03426UniProtKB/Swiss-Prot RNPH_DINSHRibonuclease PH
BJannaschia sp. (strain CCS1)JANSC00206UniProtKB/TrEMBL Q28VY9RNAse PH
BKetogulonicigenium vulgare (strain Y25)KETVY02619UniProtKB/TrEMBL E3F136ribonuclease PH
BParacoccus denitrificans (strain Pd 1222)PARDP00010UniProtKB/TrEMBL A1AXY3ribonuclease PH KEGG: rsp:RSP_1221 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BPseudovibrio sp. (strain FO-BEG1)PSEUV00368UniProtKB/TrEMBL G8PK60Ribonuclease PH
BRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)RHOCB03440UniProtKB/TrEMBL D5ASX5Ribonuclease PH
BRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS402848UniProtKB/TrEMBL Q3IYI2RNAse PH IMG reference gene:2512956265; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BRhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS502540UniProtKB/Swiss-Prot RNPH_RHOS5Ribonuclease PH
BRhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS102845UniProtKB/Swiss-Prot RNPH_RHOS1ribonuclease PH KEGG: rsp:RSP_1221 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BRhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK02597UniProtKB/Swiss-Prot RNPH_RHOSKRibonuclease PH
BRoseobacter denitrificans (strain ATCC 33942 / OCh 114)ROSDO00399UniProtKB/Swiss-Prot RNPH_ROSDOribonuclease PH
BRoseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)ROSLO04000UniProtKB/TrEMBL F7ZGF5ribonuclease PH
BRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)RUEPO00008UniProtKB/Swiss-Prot RNPH_RUEPOribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BRuegeria sp. (strain TM1040)RUEST02861UniProtKB/Swiss-Prot RNPH_RUESTRNAse PH
BAcetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153)ACEP300062UniProtKB/TrEMBL C7JAU4Ribonuclease PH
BAcidiphilium cryptum (strain JF-5)ACICJ01628UniProtKB/TrEMBL A5FZ37Ribonuclease PH
BAcidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301)ACIMA01679UniProtKB/TrEMBL F0IZ45ribonuclease PH protein synonym:tRNA nucleotidyltransferase
BGluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA01332UniProtKB/TrEMBL A9HF53Putative Ribonuclease PH
BGluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693)GLUXN01884ncbi logo BAK84362.1ribonuclease PH
BGluconobacter oxydans (strain 621H)GLUOX01231UniProtKB/TrEMBL Q5FRF3Ribonuclease PH pmp logo
BGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)GRABC00025UniProtKB/TrEMBL Q0BW79Ribonuclease PH
BAzospirillum lipoferum (strain 4B)AZOL402729UniProtKB/TrEMBL G7Z6X9RNase PH Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512252, 1885537, 6207018; Product type e : enzyme
BMagnetospirillum magneticum (strain AMB-1 / ATCC 700264)MAGSA04450UniProtKB/TrEMBL Q2VYM3RNase PH
BRhodospirillum centenum (strain ATCC 51521 / SW)RHOCS02875UniProtKB/TrEMBL B6IVK4Ribonuclease PH
BRhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT03630UniProtKB/Swiss-Prot RNPH_RHORTRNAse PH
BMidichloria mitochondrii (strain IricVA)MIDMI00359UniProtKB/TrEMBL F7XVJ7ribonuclease PH
BOrientia tsutsugamushi (strain Boryong)ORITB00211UniProtKB/TrEMBL A5CCD0TRNA nucleotidyltransferase
BOrientia tsutsugamushi (strain Ikeda)ORITI01099UniProtKB/TrEMBL B3CTZ6Ribonuclease PH
BRickettsia africae (strain ESF-5)RICAE00747UniProtKB/Swiss-Prot RNPH_RICAERibonuclease PH
BRickettsia akari (strain Hartford)RICAH00903UniProtKB/Swiss-Prot RNPH_RICAHRibonuclease PH
BRickettsia amblyommii (strain GAT-30V)RICAG01032UniProtKB/TrEMBL H8K2Q6ribonuclease PH COG0689 RNase PH
BRickettsia australis (strain Cutlack)RICAC00494UniProtKB/TrEMBL H8K6R2ribonuclease PH COG0689 RNase PH
BRickettsia bellii (strain OSU 85-389)RICB800626UniProtKB/Swiss-Prot RNPH_RICB8Ribonuclease PH
BRickettsia bellii (strain RML369-C)RICBR00593UniProtKB/Swiss-Prot RNPH_RICBRRibonuclease PH
BRickettsia canadensis (strain McKiel)RICCK00312UniProtKB/Swiss-Prot RNPH_RICCKRibonuclease PH
BRickettsia conorii (strain ATCC VR-613 / Malish 7)RICCN00975UniProtKB/Swiss-Prot RNPH_RICCNRibonuclease PH
BRickettsia felis (strain ATCC VR-1525 / URRWXCal2)RICFE00382UniProtKB/Swiss-Prot RNPH_RICFERibonuclease PH
BRickettsia japonica (strain ATCC VR-1363 / YH)RICJY00649UniProtKB/TrEMBL G4KNL9ribonuclease PH
BRickettsia massiliae (strain Mtu5)RICM500694UniProtKB/TrEMBL A8F2B7Ribonuclease PH
BRickettsia montanensis (strain OSU 85-930)RICMS00360UniProtKB/TrEMBL H8KC05ribonuclease PH COG0689 RNase PH
BRickettsia parkeri (strain Portsmouth)RICPT00956ncbi logo AFC75151.1ribonuclease PH COG0689 RNase PH
BRickettsia peacockii (strain Rustic)RICPU00858UniProtKB/Swiss-Prot RNPH_RICPURibonuclease PH
BRickettsia philipii (strain 364D)RICP300971UniProtKB/TrEMBL H6PUP9ribonuclease PH COG0689 RNase PH
BRickettsia prowazekii (strain Madrid E)RICPR00594UniProtKB/Swiss-Prot RNPH_RICPRRibonuclease PH
BRickettsia prowazekii (strain Rp22)RICPP00659UniProtKB/TrEMBL D5AXN3Ribonuclease PH pmp logo
BRickettsia rhipicephali (strain 3-7-female6-CWPP)RICR300986UniProtKB/TrEMBL H8KHS1ribonuclease PH COG0689 RNase PH
BRickettsia rickettsii (strain Iowa)RICRO01001UniProtKB/Swiss-Prot RNPH_RICROribonuclease PH
BRickettsia rickettsii (strain Sheila Smith)RICRS00962UniProtKB/Swiss-Prot RNPH_RICRSRibonuclease PH
BRickettsia slovaca (strain 13-B)RICS100807ncbi logo AEV92504.1Ribonuclease PH
BErythrobacter litoralis (strain HTCC2594)ERYLH01196UniProtKB/Swiss-Prot RNPH_ERYLHRNase PH COG0689 RNase PH
BNovosphingobium aromaticivorans (strain DSM 12444)NOVAD02040UniProtKB/TrEMBL Q2G6M3Ribonuclease PH
BSphingobium japonicum (strain NBRC 101211 / UT26S)SPHJU01048UniProtKB/TrEMBL D4YZW8ribonuclease PH
BSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)SPHWW00562UniProtKB/Swiss-Prot RNPH_SPHWWRibonuclease PH
BSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256)SPHAL00249UniProtKB/Swiss-Prot RNPH_SPHALribonuclease PH
BZymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)ZYMMA01139ncbi logo AEH63013.1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: zmn:Za10_1163 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BZymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)ZYMMO00014UniProtKB/Swiss-Prot RNPH_ZYMMOribonuclease PH TIGRFAM: ribonuclease PH; KEGG: swi:Swit_0567 RNAse PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BZymomonas mobilis subsp. mobilis (strain NCIB 11163)ZYMMN01153ncbi logo ACV75707.1ribonuclease PH KEGG: ccs:CCNA_00151 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BZymomonas mobilis subsp. pomaceae (strain ATCC 29192 / JCM 10191 / NBRC 13757 / NCIMB 11200 / NRRL B-4491)ZYMMT01129UniProtKB/TrEMBL F8ETT8ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: dar:Daro_3851 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BMicavibrio aeruginosavorus (strain ARL-13)MICAA01715UniProtKB/TrEMBL G2KRV5ribonuclease PH
BPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)POLGS00023UniProtKB/TrEMBL F2IYE9Ribonuclease PH
BPelagibacter sp. (strain IMCC9063)PELSM00365UniProtKB/TrEMBL F2I073ribonuclease PH
BPuniceispirillum marinum (strain IMCC1322)PUNMI01620UniProtKB/TrEMBL D5BUB6
BAchromobacter xylosoxidans (strain A8)ACHXA03306UniProtKB/TrEMBL E3HHX4ribonuclease PH
BAdvenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001)ADVKW01737UniProtKB/TrEMBL I3UBT7ribonuclease PH COG0689 RNase PH
BBordetella avium (strain 197N)BORA101920UniProtKB/TrEMBL Q2L0C2ribonuclease PH
BBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)BORBR02918UniProtKB/Swiss-Prot RNPH_BORBRRibonuclease PH
BBordetella bronchiseptica (strain MO149)BORBM02175ncbi logo CCJ58942.1ribonuclease PH
BBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)BORPA02956UniProtKB/Swiss-Prot RNPH_BORPARibonuclease PH
BBordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 / 18323)BORP101705UniProtKB/TrEMBL J7R560ribonuclease PH pmp logo
BBordetella pertussis (strain CS)BORPC01324ncbi logo AEE66939.1ribonuclease PH
BBordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)BORPE01454UniProtKB/Swiss-Prot RNPH_BORPERibonuclease PH
BBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD02211UniProtKB/TrEMBL A9ILQ1Ribonuclease PH
BPusillimonas sp. (strain T7-7)PUSST01191UniProtKB/TrEMBL F4GTF8ribonuclease PH
BTaylorella equigenitalis (strain MCE9)TAYEM00073UniProtKB/TrEMBL E8UD48Ribonuclease PH
BBurkholderia ambifaria (strain ATCC BAA-244 / AMMD)BURCM00852UniProtKB/Swiss-Prot RNPH_BURCMribonuclease PH KEGG: bpm:BURPS1710b_3051 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BBurkholderia ambifaria (strain MC40-6)BURA400855UniProtKB/Swiss-Prot RNPH_BURA4Ribonuclease PH
BBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)BURCJ02901UniProtKB/Swiss-Prot RNPH_BURCJribonuclease PH
BBurkholderia cenocepacia (strain AU 1054)BURCA00512UniProtKB/Swiss-Prot RNPH_BURCARibonuclease PH
BBurkholderia cenocepacia (strain HI2424)BURCH00989UniProtKB/Swiss-Prot RNPH_BURCHribonuclease PH KEGG: bcn:Bcen_0518 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BBurkholderia cenocepacia (strain MC0-3)BURCC00949UniProtKB/Swiss-Prot RNPH_BURCCRibonuclease PH
BBurkholderia multivorans (strain ATCC 17616 / 249)BURM102365UniProtKB/Swiss-Prot RNPH_BURM1Ribonuclease PH
BBurkholderia sp. (strain 383)BURS300918UniProtKB/Swiss-Prot Q39IL4RNAse PH
BBurkholderia vietnamiensis (strain G4 / LMG 22486)BURVG00883UniProtKB/Swiss-Prot RNPH_BURVGRibonuclease PH
BBurkholderia gladioli (strain BSR3)BURGS00884UniProtKB/TrEMBL F2LAU6Ribonuclease PH
BBurkholderia glumae (strain BGR1)BURGB00797UniProtKB/TrEMBL C5ACI1Ribonuclease PH
BBurkholderia mallei (strain ATCC 23344)BURMA01719UniProtKB/Swiss-Prot RNPH_BURMARibonuclease PH
BBurkholderia mallei (strain NCTC 10229)BURM902488UniProtKB/Swiss-Prot RNPH_BURM9Ribonuclease PH
BBurkholderia mallei (strain NCTC 10247)BURM701843UniProtKB/Swiss-Prot RNPH_BURM7Ribonuclease PH
BBurkholderia mallei (strain SAVP1)BURMS00762ncbi logo ABM52220.1Ribonuclease PH
BBurkholderia phymatum (strain DSM 17167 / STM815)BURP800659UniProtKB/Swiss-Prot RNPH_BURP8Ribonuclease PH
BBurkholderia phytofirmans (strain DSM 17436 / PsJN)BURPP03003UniProtKB/Swiss-Prot RNPH_BURPPRibonuclease PH
BBurkholderia pseudomallei (strain 1106a)BURP002958UniProtKB/Swiss-Prot RNPH_BURP0Ribonuclease PH
BBurkholderia pseudomallei (strain 668)BURP602907UniProtKB/Swiss-Prot RNPH_BURP6Ribonuclease PH
BBurkholderia pseudomallei (strain K96243)BURPS02578UniProtKB/Swiss-Prot RNPH_BURPSRibonuclease PH
BBurkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454)BURRH00648UniProtKB/TrEMBL E5ANJ7Ribonuclease PH (EC 2.7.7.56) Ribonuclease PH (EC 2.7.7.56) COG: RNase PH Pfam: 3' exoribonuclease family, domain 1::PF01138
3' exoribonuclease family, domain 2::PF03725
BBurkholderia sp. (strain CCGE1002)BURSC02238UniProtKB/TrEMBL D5WB52ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: bxe:Bxe_A0903 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BBurkholderia sp. (strain CCGE1003)BURSG02623UniProtKB/TrEMBL E1T6X1Ribonuclease PH
BBurkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA01536UniProtKB/Swiss-Prot RNPH_BURTAribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BBurkholderia xenovorans (strain LB400)BURXL03415UniProtKB/Swiss-Prot RNPH_BURXLRibonuclease PH
BRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME00843UniProtKB/Swiss-Prot RNPH_RALMEribonuclease PH
BCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)CUPNH00942UniProtKB/Swiss-Prot RNPH_CUPNHRibonuclease PH
BCupriavidus pinatubonensis (strain JMP 134 / LMG 1197)CUPPJ02450UniProtKB/TrEMBL Q46YE4Ribonuclease PH
BCupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR00921UniProtKB/Swiss-Prot RNPH_CUPTRRNase PH
BPolynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1)POLSQ01071UniProtKB/TrEMBL A4SXT2Ribonuclease PH
BRalstonia pickettii (strain 12D)RALP101915UniProtKB/TrEMBL C6BJZ5Ribonuclease PH
BRalstonia pickettii (strain 12J)RALPJ02186UniProtKB/Swiss-Prot RNPH_RALPJRibonuclease PH
BRalstonia solanacearum (strain GMI1000)RALSO02125UniProtKB/Swiss-Prot RNPH_RALSORibonuclease PH
BRalstonia solanacearum (strain Po82)RALS801275UniProtKB/TrEMBL F6G013ribonuclease ph (rnase ph) (trnanucleotidyltransferase) protein
BAcidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)ACIAP03446UniProtKB/TrEMBL F0QBN2
BAcidovorax citrulli (strain AAC00-1)ACIAC03413UniProtKB/TrEMBL A1TT42ribonuclease PH KEGG: pol:Bpro_1339 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BAcidovorax ebreus (strain TPSY)ACIET00844UniProtKB/TrEMBL B9MEK0Ribonuclease PH
BAcidovorax sp. (strain JS42)ACISJ00888UniProtKB/TrEMBL A1W4I8ribonuclease PH KEGG: pol:Bpro_1339 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BAlicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)ALIDK03783UniProtKB/TrEMBL F4GGS1Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: dia:Dtpsy_0858 ribonuclease PH
BPolaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ01315UniProtKB/TrEMBL Q12DV3ribonuclease PH
BRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)RAMTT03344UniProtKB/TrEMBL F5XYN7tRNA nucleotidyltransferase
BAlbidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)ALBFT01586ncbi logo ABD69359.1RNAse PH
BVariovorax paradoxus (strain EPS)VARPE04878UniProtKB/TrEMBL E6V238ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: vap:Vapar_4325 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BVariovorax paradoxus (strain S110)VARPS04267UniProtKB/TrEMBL C5CYX5ribonuclease PH KEGG: dia:Dtpsy_0858 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCollimonas fungivorans (strain Ter331)COLFT02439UniProtKB/TrEMBL G0AH35Ribonuclease PH
BHerminiimonas arsenicoxydansHERAR02014UniProtKB/TrEMBL A4G6X6RNase PH
BJanthinobacterium sp. (strain Marseille)JANMA01331UniProtKB/TrEMBL A6SXM5Ribonuclease PH
BLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP00702UniProtKB/TrEMBL B1Y0J9Ribonuclease PH
BMethylibium petroleiphilum (strain PM1)METPP02657UniProtKB/TrEMBL A2SJC0TRNA nucleotidyltransferase
BRubrivivax gelatinosus (strain NBRC 100245 / IL144)RUBGI03541UniProtKB/TrEMBL I0HV50ribonuclease PH
BThiomonas intermedia (strain K12)THIK102564UniProtKB/TrEMBL D5X693ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: dia:Dtpsy_0858 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGallionella capsiferriformans (strain ES-2)GALCS00391UniProtKB/TrEMBL D9SJT8ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: slt:Slit_0403 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSideroxydans lithotrophicus (strain ES-1)SIDLE00402UniProtKB/TrEMBL D5CM30ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: mmb:Mmol_0174 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BThiobacillus denitrificans (strain ATCC 25259)THIDA00476UniProtKB/TrEMBL Q3SLI0ribonuclease PH
BMethylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)METFK00043UniProtKB/Swiss-Prot RNPH_METFKribonuclease PH
BMethylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540)METML00172UniProtKB/TrEMBL C6WYV9Ribonuclease PH
BMethylovorus glucosetrophus (strain SIP3-4)METGS00047UniProtKB/TrEMBL C6X7Q4ribonuclease PH KEGG: mfa:Mfla_0043 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BMethylovorus sp. (strain MP688)METS600046ncbi logo ADQ83246.1ribonuclease PH
BChromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)CHRVO03841UniProtKB/Swiss-Prot RNPH_CHRVORibonuclease PH
BLaribacter hongkongensis (strain HLHK9)LARHH02597UniProtKB/Swiss-Prot RNPH_LARHHRnpH
BNeisseria gonorrhoeae (strain ATCC 700825 / FA 1090)NEIG100859UniProtKB/Swiss-Prot RNPH_NEIG1putative ribonuclease PH Best Blastp Hit: pir||A81866 tRNA nucleotidyltransferase (EC 2.7.7.56) - Neisseria meningitidis (group A strain Z2491) >gi|7380343|emb|CAB84930.1| (AL162756) ribonuclease PH [Neisseria meningitidis]; COG0689 RNase PH
BNeisseria gonorrhoeae (strain NCCP11945)NEIG200817UniProtKB/Swiss-Prot RNPH_NEIG2Putative ribonuclease PH
BNeisseria meningitidis (strain alpha14)NEIML01269UniProtKB/TrEMBL C6S7V9Ribonuclease PH
BNeisseria meningitidis serogroup A / serotype 4A (strain Z2491)NEIMA01481UniProtKB/Swiss-Prot RNPH_NEIMARibonuclease PH
BNeisseria meningitidis serogroup A (strain WUE 2594)NEIMW01280UniProtKB/TrEMBL E7BIN2ribonuclease PH (RNase PH; tRNA nucleotidyltransferase) pmp logo
BNeisseria meningitidis serogroup B (strain MC58)NEIMB01377UniProtKB/Swiss-Prot RNPH_NEIMBRibonuclease PH
BNeisseria meningitidis serogroup B (strain alpha710)NEIM701433UniProtKB/TrEMBL E3D6R0ribonuclease PH pmp logo
BNeisseria meningitidis serogroup B / serotype 15 (strain H44/76)NEIMH00666UniProtKB/TrEMBL E6MU24ribonuclease PH pmp logo
BNeisseria meningitidis serogroup B (strain G2136)NEIMG01317ncbi logo ADY94080.1ribonuclease PH
BNeisseria meningitidis serogroup B (strain M01-240149)NEIMM00621ncbi logo ADY97260.1ribonuclease PH
BNeisseria meningitidis serogroup B (strain M01-240355)NEIMP01358ncbi logo ADY99932.1ribonuclease PH
BNeisseria meningitidis serogroup B (strain M04-240196)NEIMO00652UniProtKB/TrEMBL A0A0E0TIN5ribonuclease PH pmp logo
BNeisseria meningitidis serogroup B (strain NZ-05/33)NEIMN01408UniProtKB/TrEMBL A0A0E0TR61ribonuclease PH pmp logo
BNeisseria meningitidis serogroup C (strain 053442)NEIM001328UniProtKB/Swiss-Prot RNPH_NEIM0ribonuclease PH Code: J; COG: COG0689
BNeisseria meningitidis serogroup C (strain 8013)NEIM800761UniProtKB/TrEMBL C9WYL3Ribonuclease PH
BNeisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18)NEIMF01285UniProtKB/Swiss-Prot RNPH_NEIMFRibonuclease PH
BNitrosomonas europaea (strain ATCC 19718 / NBRC 14298)NITEU00263UniProtKB/Swiss-Prot RNPH_NITEURibonuclease PH
BNitrosomonas eutropha (strain C91)NITEC00296UniProtKB/Swiss-Prot RNPH_NITECribonuclease PH KEGG: neu:NE0276 3' exoribonuclease family TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BNitrosomonas sp. (strain Is79A3)NITSI01552UniProtKB/TrEMBL F8GIM0Ribonuclease PH TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: nit:NAL212_0559 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2
BNitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)NITMU00062UniProtKB/Swiss-Prot RNPH_NITMURNAse PH
BAromatoleum aromaticum (strain EbN1)AROAE01242UniProtKB/Swiss-Prot RNPH_AROAERibonuclease PH
BAzoarcus sp. (strain BH72)AZOSB03951UniProtKB/Swiss-Prot RNPH_AZOSBribonuclease PH Ribonuclease PH (EC 2.7.7.56) (tRNA nucleotidyltransferase). Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates. High confidence in function and specificity
BDechloromonas aromatica (strain RCB)DECAR03804UniProtKB/Swiss-Prot RNPH_DECARRNAse PH
BThauera sp. (strain MZ1T)THASP03789UniProtKB/TrEMBL C4K996Ribonuclease PH
BAcidithiobacillus caldus (strain SM-1)ACICS02156UniProtKB/TrEMBL F9ZRB8Ribonuclease PH
BAcidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)ACIF202201UniProtKB/TrEMBL B7J6B0Ribonuclease PH
BAcidithiobacillus ferrooxidans (strain ATCC 53993)ACIF501881UniProtKB/TrEMBL B5ELL0Ribonuclease PH
BAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)AERHH04063UniProtKB/TrEMBL A0KQU6ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BAeromonas salmonicida (strain A449)AERS400077UniProtKB/TrEMBL A4SHC8Ribonuclease PH
BAeromonas veronii (strain B565)AERVB03837ncbi logo AEB51891.1RNase PH
BOceanimonas sp. (strain GK1)OCESG00624UniProtKB/TrEMBL H2FY60ribonuclease PH COG0689 RNase PH
BTolumonas auensis (strain DSM 9187 / TA4)TOLAT00187UniProtKB/Swiss-Prot RNPH_TOLATribonuclease PH KEGG: swd:Swoo_4568 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BAlteromonas macleodii (strain Balearic Sea AD45)ALTMB03877UniProtKB/TrEMBL K0EQ05ribonuclease PH COG0689 RNase PH
BAlteromonas macleodii (strain Black Sea 11)ALTMS03714UniProtKB/TrEMBL K0D3D9ribonuclease PH COG0689 RNase PH
BAlteromonas macleodii (strain DSM 17117 / Deep ecotype)ALTMD03992UniProtKB/Swiss-Prot RNPH_ALTMDRNase PH
BAlteromonas macleodii (strain English Channel 673)ALTME03839UniProtKB/TrEMBL A0A0E0YLI6ribonuclease PH COG0689 RNase PH
BAlteromonas sp. (strain SN2)ALTSS04281UniProtKB/TrEMBL F5ZGA9ribonuclease PH COG0689 RNase PH
BMarinobacter adhaerens (strain HP15)MARAH00298UniProtKB/TrEMBL E4PL22ribonuclease PH
BMarinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8)MARAV00510ncbi logo ABM17649.1ribonuclease PH KEGG: sde:Sde_3683 tRNA nucleotidyltransferase TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BSaccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD203664UniProtKB/Swiss-Prot RNPH_SACD2RNAse PH
BTeredinibacter turnerae (strain ATCC 39867 / T7901)TERTT00159UniProtKB/Swiss-Prot RNPH_TERTTRibonuclease PH
BColwellia psychrerythraea (strain 34H / ATCC BAA-681)COLP300095UniProtKB/Swiss-Prot RNPH_COLP3ribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BFerrimonas balearica (strain DSM 9799 / CCM 4581 / PAT)FERBD00127UniProtKB/TrEMBL E1SW41Ribonuclease PH
BIdiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)IDILO02396UniProtKB/Swiss-Prot RNPH_IDILORNase PH
BPseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)PSEA604238UniProtKB/Swiss-Prot RNPH_PSEA6Ribonuclease PH
BPseudoalteromonas haloplanktis (strain TAC 125)PSEHT02716UniProtKB/Swiss-Prot RNPH_PSEHTRNase PH (tRNA nucleotidyltransferase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1644789; Product type e : enzyme
BPseudoalteromonas sp. (strain SM9913)PSEU902775UniProtKB/TrEMBL E6RK93
BPsychromonas ingrahamii (strain 37)PSYIN03276UniProtKB/Swiss-Prot RNPH_PSYINribonuclease PH KEGG: eca:ECA0140 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BShewanella amazonensis (strain ATCC BAA-1098 / SB2B)SHEAM00318UniProtKB/Swiss-Prot RNPH_SHEAMtRNA nucleotidyltransferase KEGG: son:SO4256 ribonuclease PH
BShewanella baltica (strain OS155 / ATCC BAA-1091)SHEB500359UniProtKB/Swiss-Prot RNPH_SHEB5Ribonuclease PH
BShewanella baltica (strain OS185)SHEB800363UniProtKB/Swiss-Prot RNPH_SHEB8Ribonuclease PH
BShewanella baltica (strain OS195)SHEB900380UniProtKB/Swiss-Prot RNPH_SHEB9KEGG: shw:Sputw3181_0332 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 ribonuclease PH
BShewanella baltica (strain OS223)SHEB200380UniProtKB/Swiss-Prot RNPH_SHEB2Ribonuclease PH
BShewanella baltica (strain OS678)SHEB600384ncbi logo ADT92588.1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: shw:Sputw3181_0332 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)SHEDO00315UniProtKB/Swiss-Prot RNPH_SHEDORibonuclease PH
BShewanella frigidimarina (strain NCIMB 400)SHEFN03759UniProtKB/Swiss-Prot RNPH_SHEFNRibonuclease PH
BShewanella halifaxensis (strain HAW-EB4)SHEHH00420UniProtKB/Swiss-Prot RNPH_SHEHHRibonuclease PH
BShewanella loihica (strain ATCC BAA-1088 / PV-4)SHELP03476UniProtKB/Swiss-Prot RNPH_SHELPribonuclease PH KEGG: shm:Shewmr7_0352 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BShewanella oneidensis (strain MR-1)SHEON03985UniProtKB/Swiss-Prot RNPH_SHEONRibonuclease PH
BShewanella pealeana (strain ATCC 700345 / ANG-SQ1)SHEPA03764UniProtKB/Swiss-Prot RNPH_SHEPAKEGG: slo:Shew_3488 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 ribonuclease PH
BShewanella piezotolerans (strain WP3 / JCM 13877)SHEPW02080UniProtKB/Swiss-Prot RNPH_SHEPWRibonuclease PH
BShewanella putrefaciens (strain 200)SHEP200315UniProtKB/TrEMBL E6XFJ6ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: shw:Sputw3181_0332 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BShewanella putrefaciens (strain CN-32 / ATCC BAA-453)SHEPC00436UniProtKB/Swiss-Prot RNPH_SHEPCRibonuclease PH
BShewanella sediminis (strain HAW-EB3)SHESH00378UniProtKB/Swiss-Prot RNPH_SHESHKEGG: slo:Shew_3488 ribonuclease PH tRNA nucleotidyltransferase
BShewanella sp. (strain ANA-3)SHESA03731UniProtKB/Swiss-Prot RNPH_SHESAribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease KEGG: son:SO4256 ribonuclease PH
BShewanella sp. (strain MR-4)SHESM03580UniProtKB/Swiss-Prot RNPH_SHESMRibonuclease PH
BShewanella sp. (strain MR-7)SHESR00349UniProtKB/Swiss-Prot RNPH_SHESRRibonuclease PH
BShewanella sp. (strain W3-18-1)SHESW00328UniProtKB/Swiss-Prot RNPH_SHESWribonuclease PH KEGG: son:SO4256 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)SHEVD04055UniProtKB/TrEMBL D4ZDX6Ribonuclease PH
BShewanella woodyi (strain ATCC 51908 / MS32)SHEWM04502UniProtKB/Swiss-Prot RNPH_SHEWMRibonuclease PH
BDichelobacter nodosus (strain VCS1703A)DICNV00628UniProtKB/Swiss-Prot RNPH_DICNVRibonuclease PH
BNitrosococcus halophilus (strain Nc4)NITHN00691UniProtKB/TrEMBL D5BXG1ribonuclease PH KEGG: noc:Noc_2442 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)NITOC02318UniProtKB/Swiss-Prot RNPH_NITOCRNAse PH
BNitrosococcus watsoni (strain C-113)NITWC00645UniProtKB/TrEMBL D8KBN6ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: noc:Noc_2442 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BThiocystis violascens (strain ATCC 17096 / DSM 198 / 6111)THIV602995UniProtKB/TrEMBL I3YDY2RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BAlkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)ALKEH02424UniProtKB/Swiss-Prot RNPH_ALKEHRNAse PH KEGG: xcb:XC_0960 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease
BHalorhodospira halophila (strain DSM 244 / SL1)HALHL00952UniProtKB/Swiss-Prot RNPH_HALHLRibonuclease PH
BThioalkalivibrio sp. (strain HL-EbGR7)THISH02916UniProtKB/Swiss-Prot RNPH_THISHRibonuclease PH
BCitrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)CITK804951UniProtKB/Swiss-Prot RNPH_CITK8Ribonuclease PH
BCitrobacter rodentium (strain ICC168)CITRI03963UniProtKB/TrEMBL D2TIV8Ribonuclease PH
BCronobacter sakazakii (strain ATCC BAA-894)CROS803939UniProtKB/TrEMBL A7MQA8Putative uncharacterized protein
BCronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)CROTZ04148ncbi logo CBA34472.1Ribonuclease PH
BDickeya dadantii (strain 3937)DICD304323UniProtKB/TrEMBL E0SLM4Ribonuclease PH
BDickeya dadantii (strain Ech586)DICD500144UniProtKB/TrEMBL D2C181ribonuclease PH KEGG: dze:Dd1591_3965 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BDickeya dadantii (strain Ech703)DICDC00152UniProtKB/TrEMBL C6C6Q2Ribonuclease PH
BDickeya zeae (strain Ech1591)DICZE03839UniProtKB/TrEMBL C6CP22Ribonuclease PH
BEdwardsiella ictaluri (strain 93-146)EDWI900046UniProtKB/Swiss-Prot RNPH_EDWI9Ribonuclease PH
BEdwardsiella tarda (strain EIB202)EDWTE00059UniProtKB/TrEMBL D0Z934Ribonuclease PH pmp logo
BEdwardsiella tarda (strain FL6-60)EDWTF00034ncbi logo ADM40157.1Ribonuclease PH
BEnterobacter aerogenes (strain ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006)ENTAK01266ncbi logo AEG96207.1ribonuclease PH COG0689 RNase PH
BEnterobacter asburiae (strain LF7a)ENTAL00103UniProtKB/TrEMBL G2S806Ribonuclease PH TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: enc:ECL_00118 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2
BEnterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56)ENTCC00117ncbi logo ADF59686.1ribonuclease PH
BEnterobacter lignolyticus (strain SCF1)ENTLS00104UniProtKB/TrEMBL E3G8J4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: enc:ECL_00118 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BEnterobacter sp. (strain 638)ENT3800096UniProtKB/Swiss-Prot RNPH_ENT38Ribonuclease PH
BErwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3)ERWAE00067ncbi logo CBJ44742.1ribonuclease PH
BErwinia amylovora (strain CFBP1430)ERWAC00071UniProtKB/TrEMBL D4HU90ribonuclease PH Ribonuclease PH (tRNA nucleotidyltransferase)
BErwinia billingiae (strain Eb661)ERWBE00056UniProtKB/TrEMBL D8MKD1Ribonuclease PH silverDB:661Eb00071
BErwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96)ERWP600075UniProtKB/TrEMBL D2TBZ1ribonuclease PH Ribonuclease PH (tRNA nucleotidyltransferase)
BErwinia pyrifoliae (strain Ep1/96)ERWPE00072ncbi logo CAX53831.1Ribonuclease PH (TRNA nucleotidyltransferase) silverDB:cEP00073
BErwinia sp. (strain Ejp617)ERWSE01211UniProtKB/TrEMBL E3DBQ1ribonuclease PH
BErwinia tasmaniensis (strain DSM 17950 / Et1/99)ERWT900061UniProtKB/Swiss-Prot RNPH_ERWT9Ribonuclease PH
BEscherichia coli (strain 'clone D i14')ECOC104045ncbi logo AER91574.1ribonuclease PH
BEscherichia coli (strain 'clone D i2')ECOC204045ncbi logo AER86655.1ribonuclease PH
BEscherichia coli (strain 55989 / EAEC)ECO5503950UniProtKB/TrEMBL B7L767Ribonuclease PH pmp logo
BEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)ECOD100059ncbi logo ACX37760.1Ribonuclease PH
BEscherichia coli (strain ATCC 55124 / KO11)ECOKO00077UniProtKB/TrEMBL E8YAB4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: sbc:SbBS512_E4068 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 pmp logo
BEscherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W)ECOLW03942UniProtKB/TrEMBL E0J5C1ribonuclease PH pmp logo
BEscherichia coli (strain B / BL21)ECOBB03378ncbi logo CAQ33969.1Rph protein
BEscherichia coli (strain B / BL21-DE3)ECOBD00081UniProtKB/TrEMBL C6EDE8Ribonuclease PH pmp logo
BEscherichia coli (strain K12)ECOLI03522UniProtKB/Swiss-Prot P03842Ribonuclease PH
BEscherichia coli (strain K12 / MC4100 / BW2952)ECOBW03286UniProtKB/Swiss-Prot RNPH_ECOBWRibonuclease PH
BEscherichia coli (strain SE11)ECOSE03906UniProtKB/Swiss-Prot RNPH_ECOSERibonuclease PH
BEscherichia coli (strain SMS-3-5 / SECEC)ECOSM03802UniProtKB/Swiss-Prot RNPH_ECOSMRibonuclease PH
BEscherichia coli (strain UM146)ECOUM03583ncbi logo ADN73020.1ribonuclease PH COG0689 RNase PH
BEscherichia coli (strain UTI89 / UPEC)ECOUT04092UniProtKB/TrEMBL Q1R4U9Ribonuclease PH
BEscherichia coli (strain B / REL606)ECOBR03386ncbi logo ACT41143.1Ribonuclease PH
BEscherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)ECOLC00063UniProtKB/Swiss-Prot RNPH_ECOLCRibonuclease PH
BEscherichia coli O103:H2 (strain 12009 / EHEC)ECO1004379UniProtKB/TrEMBL C8TZ74ribonuclease PH pmp logo
BEscherichia coli O104:H4 (strain 2009EL-2071)ECO1E00107ncbi logo AFS88718.1ribonuclease PH COG0689 RNase PH
BEscherichia coli O111:H- (strain 11128 / EHEC)ECO1A04309UniProtKB/TrEMBL C8UJ30Ribonuclease PH pmp logo
BEscherichia coli O127:H6 (strain E2348/69 / EPEC)ECO2703828UniProtKB/Swiss-Prot RNPH_ECO27Ribonuclease PH
BEscherichia coli O139:H28 (strain E24377A / ETEC)ECO2403907UniProtKB/Swiss-Prot RNPH_ECO24Ribonuclease PH
BEscherichia coli O150:H5 (strain SE15)ECOS503465UniProtKB/TrEMBL A0A0F6GUC4ribonuclease PH pmp logo
BEscherichia coli O157:H7ECO5704367UniProtKB/Swiss-Prot RNPH_ECO57Ribonuclease PH pmp logo
BEscherichia coli O157:H7 (strain EC4115 / EHEC)ECO5E04310UniProtKB/Swiss-Prot RNPH_ECO5ERibonuclease PH
BEscherichia coli O157:H7 (strain TW14359 / EHEC)ECO5T04334ncbi logo ACT74359.1Ribonuclease PH
BEscherichia coli O17:K52:H18 (strain UMN026 / ExPEC)ECOLU04037UniProtKB/TrEMBL B7NEU7Ribonuclease PH
BEscherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)ECOKI03916ncbi logo ADE91517.1ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BEscherichia coli O1:K1 / APECECOK103607UniProtKB/Swiss-Prot RNPH_ECOK1ribonuclease PH
BEscherichia coli O26:H11 (strain 11368 / EHEC)ECO2604755UniProtKB/TrEMBL C8TLI5ribonuclease PH pmp logo
BEscherichia coli O44:H18 (strain 042 / EAEC)ECO4403908UniProtKB/TrEMBL D3H293ribonuclease PH pmp logo
BEscherichia coli O45:K1 (strain S88 / ExPEC)ECO4503859UniProtKB/TrEMBL B7MFK4Ribonuclease PH
BEscherichia coli O55:H7 (strain CB9615 / EPEC)ECOCB04151UniProtKB/TrEMBL D3QV68Ribonuclease PH pmp logo
BEscherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)ECOL604330UniProtKB/Swiss-Prot RNPH_ECOL6Ribonuclease PH
BEscherichia coli O6:K15:H31 (strain 536 / UPEC)ECOL503687UniProtKB/Swiss-Prot RNPH_ECOL5Ribonuclease PH
BEscherichia coli O78:H11 (strain H10407 / ETEC)ECOH103811UniProtKB/TrEMBL E3PN05ribonuclease PH pmp logo
BEscherichia coli O7:K1 (strain IAI39 / ExPEC)ECO7I03949ncbi logo CAR20270.1Ribonuclease PH
BEscherichia coli O8 (strain IAI1)ECO8A03670ncbi logo CAR00611.1Ribonuclease PH
BEscherichia coli O81 (strain ED1a)ECO8104098UniProtKB/TrEMBL B7N1U4Ribonuclease PH
BEscherichia coli O83:H1 (strain NRG 857C / AIEC)ECO8N03592ncbi logo ADR29031.1ribonuclease PH COG0689 RNase PH
BEscherichia coli O9:H4 (strain HS)ECOHS03589UniProtKB/Swiss-Prot RNPH_ECOHSRibonuclease PH
BEscherichia coli OR:K5:H- (strain ABU 83972)ECOAB03886ncbi logo ADN48517.1Ribonuclease PH
BEscherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)ESCF303760UniProtKB/TrEMBL B7LVK5ribonuclease PH Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 1885537, 1512252, 1512253; Product type e : enzyme
BKlebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686)KLEOK01178ncbi logo AEX02927.1ribonuclease PH COG0689 RNase PH
BKlebsiella pneumoniae (strain 342)KLEP300109UniProtKB/Swiss-Prot RNPH_KLEP3Ribonuclease PH
BKlebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)KLEP703926UniProtKB/Swiss-Prot RNPH_KLEP7Ribonuclease PH
BKlebsiella pneumoniae subsp. pneumoniae (strain HS11286)KLEPH05114ncbi logo AEW63844.1tRNA nucleotidyltransferase
BKlebsiella variicola (strain At-22)KLEVT00113UniProtKB/TrEMBL D3RC01Ribonuclease PH
BPantoea ananatis (strain AJ13355)PANAA03121ncbi logo BAK13207.1ribonuclease Rph similar to Yersinia aldovae ATCC 35236, ribonuclease PH (NCBI: ZP_04621595.1) COG: translation, ribosomal structure and biogenesis subcellular localization as predicted by Psort 2.0: cytoplasmic
BPantoea ananatis (strain LMG 20103)PANAM03909UniProtKB/TrEMBL D4GE34Ribonuclease PH
BPantoea sp. (strain At-9b)PANSA03871UniProtKB/TrEMBL E6WAK5ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: spe:Spro_4847 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPantoea vagans (strain C9-1)PANVC03120UniProtKB/TrEMBL E1SIU1ribonuclease PH RNase PH
BPectobacterium carotovorum subsp. carotovorum (strain PC1)PECCP04057UniProtKB/Swiss-Prot RNPH_PECCPRibonuclease PH
BPectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)PECAS00136UniProtKB/Swiss-Prot RNPH_PECASribonuclease PH Similar to Escherichia coli ribonuclease PH Rph or b3643 SWALL:RNPH_ECOLI (SWALL:P03842) (238 aa) fasta scores: E(): 8.2e-78, 85.71% id in 238 aa
BPectobacterium sp. (strain SCC3193)PECSS04438ncbi logo AFI92593.1Ribonuclease PH
BPectobacterium wasabiae (strain WPP163)PECWW04212UniProtKB/TrEMBL D0KD71Ribonuclease PH
BPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)PHOAA04293UniProtKB/TrEMBL C7BT31Ribonuclease ph
BPhotorhabdus luminescens subsp. laumondii (strain TT01)PHOLL04728UniProtKB/Swiss-Prot RNPH_PHOLLRibonuclease PH
BProteus mirabilis (strain HI4320)PROMH03117UniProtKB/Swiss-Prot RNPH_PROMHRibonuclease PH
BProvidencia stuartii (strain MRSN 2154)PROSM02076UniProtKB/TrEMBL I0DUI0ribonuclease PH COG0689 RNase PH
BRahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65)RAHAC04242UniProtKB/TrEMBL H2IY95ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BRahnella sp. (strain Y9602)RAHSY04303ncbi logo ADW75949.1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: spe:Spro_4847 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSalmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)SALBC03260ncbi logo CCC32366.1RNase PH
BSalmonella dublin (strain CT_02021853)SALDC03730UniProtKB/Swiss-Prot RNPH_SALDCRibonuclease PH
BSalmonella agona (strain SL483)SALA403665UniProtKB/Swiss-Prot RNPH_SALA4Ribonuclease PH
BSalmonella choleraesuis (strain SC-B67)SALCH03611UniProtKB/Swiss-Prot RNPH_SALCHRNase PH IPR002381: Ribonuclease PH
BSalmonella pullorum (strain RKS5078 / SGSC2294)SALPS03599ncbi logo AET56068.1RNase PH
BSalmonella heidelberg (strain SL476)SALHS03776UniProtKB/Swiss-Prot RNPH_SALHSRibonuclease PH
BSalmonella paratyphi C (strain RKS4594)SALPC03659UniProtKB/TrEMBL C0Q1X5Ribonuclease PH
BSalmonella schwarzengrund (strain CVM19633)SALSV03644UniProtKB/Swiss-Prot RNPH_SALSVRibonuclease PH
BSalmonella enteritidis PT4 (strain P125109)SALEP03531UniProtKB/Swiss-Prot RNPH_SALEPRNase PH
BSalmonella gallinarum (strain 287/91 / NCTC 13346)SALG203551UniProtKB/Swiss-Prot RNPH_SALG2RNase PH
BSalmonella newport (strain SL254)SALNS03744UniProtKB/Swiss-Prot RNPH_SALNSRibonuclease PH
BSalmonella paratyphi A (strain AKU_12601)SALPK03489UniProtKB/Swiss-Prot RNPH_SALPKRNase PH
BSalmonella paratyphi A (strain ATCC 9150 / SARB42)SALPA03337UniProtKB/Swiss-Prot RNPH_SALPARNase PH similar to Salmonella typhi CT18 RNase PH
BSalmonella typhiSALTI03697UniProtKB/Swiss-Prot RNPH_SALTIRibonuclease PH pmp logo
BSalmonella typhimurium (strain 4/74)SALT403761UniProtKB/TrEMBL E8XGT3ribonuclease PH pmp logo
BSalmonella typhimurium (strain D23580)SALTD03695ncbi logo CBG26736.1RNase PH pfam_scan;Pfam:PF01138;;E()=2.2E-32;score=111.4;quer y 10-140;description=RNase_PH pfam_scan;Pfam:PF03725;;E()=1.7E-15;score=56.2;query 157-222;description=RNase_PH_C
BSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)SALTY03605UniProtKB/Swiss-Prot RNPH_SALTYRibonuclease PH
BSalmonella typhimurium (strain 14028s / SGSC 2262)SALT104342UniProtKB/TrEMBL A0A0F6B8N2ribonuclease PH RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs pmp logo
BSalmonella typhimurium (strain SL1344)SALTS03677ncbi logo CBW19794.1Ribonuclease PH
BSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)SALAR03736UniProtKB/Swiss-Prot RNPH_SALARPutative uncharacterized protein
BSerratia plymuthica (strain AS9)SERSA04870ncbi logo AEF48037.1Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: spe:Spro_4847 ribonuclease PH
BSerratia proteamaculans (strain 568)SERP504817UniProtKB/Swiss-Prot RNPH_SERP5Ribonuclease PH
BShigella boydii serotype 18 (strain CDC 3083-94 / BS512)SHIB303164UniProtKB/Swiss-Prot RNPH_SHIB3Ribonuclease PH
BShigella boydii serotype 4 (strain Sb227)SHIBS03085UniProtKB/Swiss-Prot RNPH_SHIBSRNase PH Code: J; COG: COG0689
BShigella dysenteriae serotype 1 (strain Sd197)SHIDS03240UniProtKB/Swiss-Prot RNPH_SHIDSRNase PH Code: J; COG: COG0689
BShigella flexneriSHIFL03984UniProtKB/Swiss-Prot RNPH_SHIFLRNase PH Code: J; COG: COG0689 pmp logo
BShigella flexneri serotype 5b (strain 8401)SHIF803357UniProtKB/Swiss-Prot RNPH_SHIF8RNase PH Code: J; COG: COG0689
BShigella flexneri serotype X (strain 2002017)SHIF203438UniProtKB/TrEMBL D2AB04Ribonuclease PH pmp logo
BShigella sonnei (strain Ss046)SHISS03164UniProtKB/Swiss-Prot RNPH_SHISSRNase PH Code: J; COG: COG0689
BShimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74)SHIBC03770UniProtKB/TrEMBL I2BEJ0ribonuclease PH
BSodalis glossinidius (strain morsitans)SODGM02184UniProtKB/Swiss-Prot RNPH_SODGMribonuclease PH
BXenorhabdus bovienii (strain SS-2004)XENBS04094UniProtKB/TrEMBL D3V740RNase PH
BXenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)XENNA00173UniProtKB/TrEMBL D3VGY4RNase PH
BYersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)YERE800055UniProtKB/Swiss-Prot RNPH_YERE8Ribonuclease PH
BYersinia enterocolitica subsp. palearctica serotype O:3 (strain DSM 13030 / CIP 106945 / Y11)YERE102848ncbi logo CBY25275.1ribonuclease PH
BYersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))YERE300055ncbi logo ADZ40555.1
BYersinia pestisYERPE00040UniProtKB/Swiss-Prot RNPH_YERPERibonuclease PH pmp logo
BYersinia pestis (strain D106004)YERPD00038ncbi logo ACY56951.1ribonuclease PH
BYersinia pestis (strain D182038)YERP100040ncbi logo ACY60733.1Ribonuclease PH
BYersinia pestis (strain Pestoides F)YERPP03652UniProtKB/Swiss-Prot RNPH_YERPPRibonuclease PH
BYersinia pestis (strain Z176003)YERPZ00037ncbi logo ADE62951.1Ribonuclease PH
BYersinia pestis bv. Antiqua (strain Angola)YERPG00040UniProtKB/Swiss-Prot RNPH_YERPGRibonuclease PH
BYersinia pestis bv. Antiqua (strain Antiqua)YERPA03302UniProtKB/Swiss-Prot RNPH_YERPARibonuclease PH pmp logo
BYersinia pestis bv. Antiqua (strain Nepal516)YERPN03652UniProtKB/Swiss-Prot RNPH_YERPNRibonuclease PH
BYersinia pestis bv. Medievalis (strain Harbin 35)YERPH00181ncbi logo ADV96969.1ribonuclease PH
BYersinia pseudotuberculosis serotype I (strain IP32953)YERPS00041UniProtKB/Swiss-Prot RNPH_YERPSRibonuclease PH
BYersinia pseudotuberculosis serotype IB (strain PB1/+)YERPB00041UniProtKB/Swiss-Prot RNPH_YERPBRibonuclease PH
BYersinia pseudotuberculosis serotype O:1b (strain IP 31758)YERP300052UniProtKB/Swiss-Prot RNPH_YERP3Ribonuclease PH
BYersinia pseudotuberculosis serotype O:3 (strain YPIII)YERPY04082UniProtKB/Swiss-Prot RNPH_YERPYRibonuclease PH
BHamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)HAMD500472UniProtKB/Swiss-Prot RNPH_HAMD5Ribonuclease PH
BEnterobacteriaceae bacterium (strain FGI 57)ENTBF00080UniProtKB/TrEMBL L0M0D4RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BCoxiella burnetii (strain CbuG_Q212)COXB201482ncbi logo ACJ18983.1Ribonuclease PH
BCoxiella burnetii (strain CbuK_Q154)COXB100437ncbi logo ACJ19776.1ribonuclease PH
BCoxiella burnetii (strain Dugway 5J108-111)COXBN01664UniProtKB/Swiss-Prot RNPH_COXBNRibonuclease PH
BCoxiella burnetii (strain RSA 331 / Henzerling II)COXBR00338UniProtKB/Swiss-Prot RNPH_COXBRRibonuclease PH
BCoxiella burnetii (strain RSA 493 / Nine Mile phase I)COXBU00253UniProtKB/Swiss-Prot RNPH_COXBURibonuclease PH
BLegionella longbeachae serogroup 1 (strain NSW150)LEGLN00926UniProtKB/TrEMBL D3HQT1Ribonuclease PH
BLegionella pneumophila (strain Corby)LEGPC01444UniProtKB/Swiss-Prot RNPH_LEGPCRibonuclease PH
BLegionella pneumophila (strain Lens)LEGPL01985UniProtKB/Swiss-Prot RNPH_LEGPLRibonuclease PH (RNase PH) (tRNA nucleotidyltransferase)
BLegionella pneumophila (strain Paris)LEGPA01984UniProtKB/Swiss-Prot RNPH_LEGPARibonuclease PH (RNase PH) (tRNA nucleotidyltransferase)
BLegionella pneumophila serogroup 1 (strain 2300/99 Alcoy)LEGP202124UniProtKB/TrEMBL D5T5Y9ribonuclease PH COG0689, Rph, RNase PH [Translation, ribosomal structure and biogenesis]
BLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)LEGPH02209UniProtKB/Swiss-Prot RNPH_LEGPHRibonuclease PH FIG00135600
BMethylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)METCA02840UniProtKB/Swiss-Prot RNPH_METCARibonuclease PH
BMethylomicrobium alcaliphilumMETAA03551ncbi logo CCE25296.1Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) Evidence 2b : Function of strongly homologous gene; PubMedId : 1512252, 1512253, 1885537; Product type e : enzyme
BMethylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z)META203550UniProtKB/TrEMBL G4SXD2Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) Evidence 2b : Function of strongly homologous gene; PubMedId : 1512252, 1512253, 1885537; Product type e : enzyme
BMethylomonas methanica (strain MC09)METMM04200UniProtKB/TrEMBL G0A3U7Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: mca:MCA3024 ribonuclease PH
BAlcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573)ALCBS00205UniProtKB/Swiss-Prot RNPH_ALCBSRibonuclease PH
BAlcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5)ALCDB00180UniProtKB/TrEMBL K0C7J5Ribonuclease PH
BKangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125)KANKD02420UniProtKB/TrEMBL C7R955ribonuclease PH KEGG: amc:MADE_04048 RNase PH (tRNA nucleotidyltransferase); TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BHahella chejuensis (strain KCTC 2396)HAHCH06039UniProtKB/Swiss-Prot RNPH_HAHCHribonuclease PH TIGRFAMsMatches:TIGR01966
BChromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)CHRSD03185UniProtKB/TrEMBL Q1QSK8ribonuclease PH
BHalomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)HALED03392UniProtKB/TrEMBL E1VCA9ribonuclease PH Ribonuclease PH - Pseudomonas aeruginosa (strain PA7),InterPro: 3 exoribonuclease, High confidence in function and specificity
BMarinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)MARM103952UniProtKB/TrEMBL F2K047Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: mmw:Mmwyl1_4361 ribonuclease PH
BMarinomonas sp. (strain MWYL1)MARMS04289UniProtKB/Swiss-Prot RNPH_MARMSRibonuclease PH
BActinobacillus pleuropneumoniae serotype 3 (strain JL03)ACTPJ00055UniProtKB/Swiss-Prot RNPH_ACTPJRibonuclease PH
BActinobacillus pleuropneumoniae serotype 5b (strain L20)ACTP200054UniProtKB/Swiss-Prot RNPH_ACTP2Ribonuclease PH
BActinobacillus pleuropneumoniae serotype 7 (strain AP76)ACTP700055UniProtKB/Swiss-Prot RNPH_ACTP7Ribonuclease PH
BActinobacillus succinogenes (strain ATCC 55618 / 130Z)ACTSZ00414UniProtKB/Swiss-Prot RNPH_ACTSZRibonuclease PH
BAggregatibacter actinomycetemcomitans serotype C (strain D11S-1)AGGAD00591UniProtKB/TrEMBL C9R2I4Ribonuclease PH
BAggregatibacter aphrophilus (strain NJ8700)AGGAN01529UniProtKB/TrEMBL C6AQ70ribonuclease PH identified by Glimmer3; putative
BMannheimia succiniciproducens (strain MBEL55E)MANSM00250UniProtKB/Swiss-Prot RNPH_MANSMRph protein RNase PH
BGallibacterium anatis (strain UMN179)GALAU01048UniProtKB/TrEMBL F4H8U4ribonuclease PH
BHaemophilus ducreyi (strain 35000HP / ATCC 700724)HAEDU00252UniProtKB/Swiss-Prot RNPH_HAEDUribonuclease PH tRNA nucleotidyltransferase
BHaemophilus influenzae (strain 10810)HAEI100330ncbi logo CBW28521.1ribonuclease PH (pseudogene)
BHaemophilus influenzae (strain 86-028NP)HAEI800329UniProtKB/Swiss-Prot RNPH_HAEI8ribonuclease PH RNase PH; tRNA nucleotidyltransferase; Similar to: HI0273, RNPH_HAEIN
BHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)HAEIN00267UniProtKB/Swiss-Prot RNPH_HAEINRibonuclease PH
BHaemophilus influenzae (strain PittEE)HAEIE00311UniProtKB/Swiss-Prot RNPH_HAEIERibonuclease PH
BHaemophilus influenzae (strain PittGG)HAEIG00668UniProtKB/Swiss-Prot RNPH_HAEIGRibonuclease PH
BHaemophilus influenzae (strain R2846 / 12)HAEI200298ncbi logo ADO95767.1Ribonuclease PH
BHaemophilus influenzae (strain R2866)HAEI600297ncbi logo ADO80294.1Ribonuclease PH
BHaemophilus parainfluenzae (strain T3T1)HAEP300924ncbi logo CBW15036.1ribonuclease PH (pseudogene)
BHaemophilus parasuis serovar 5 (strain SH0165)HAEPS01167UniProtKB/Swiss-Prot RNPH_HAEPSRibonuclease PH
BHistophilus somni (strain 129Pt)HISS101295UniProtKB/Swiss-Prot Q0I4U1RNAse PH
BHistophilus somni (strain 2336)HISS200319UniProtKB/Swiss-Prot RNPH_HISS2ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease KEGG: hso:HS_1292 ribonuclease PH
BPasteurella multocida (strain HN06)PASMH01435ncbi logo AFF24725.1ribonuclease PH
BPasteurella multocida (strain Pm70)PASMU01876UniProtKB/Swiss-Prot RNPH_PASMURibonuclease PH
BAcinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)ACIAD00047UniProtKB/Swiss-Prot Q6FFX5ribonuclease PH (RNase PH), tRNA nucleotidyltransferase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme
BAcinetobacter baumannii (strain 1656-2)ACIB100073ncbi logo ADX01707.1RNase PH
BAcinetobacter baumannii (strain AB0057)ACIB500078UniProtKB/Swiss-Prot RNPH_ACIB5Ribonuclease PH
BAcinetobacter baumannii (strain AB307-0294)ACIB303392UniProtKB/Swiss-Prot RNPH_ACIB3Ribonuclease PH
BAcinetobacter baumannii (strain ACICU)ACIBC00063UniProtKB/Swiss-Prot RNPH_ACIBCRNase PH
BAcinetobacter baumannii (strain AYE)ACIBY03525UniProtKB/Swiss-Prot RNPH_ACIBYRibonuclease PH (RNase PH), tRNA nucleotidyltransferase
BAcinetobacter baumannii (strain SDF)ACIBS00040UniProtKB/Swiss-Prot RNPH_ACIBSRibonuclease PH (RNase PH), tRNA nucleotidyltransferase
BAcinetobacter baumannii (strain TCDC-AB0715)ACIBD00071ncbi logo ADX90510.1ribonuclease PH
BAcinetobacter calcoaceticus (strain PHEA-2)ACICP02958UniProtKB/TrEMBL F0KIP5ribonuclease PH (RNase PH), tRNA nucleotidyltransferase
BAcinetobacter oleivorans (strain JCM 16667 / KCTC 23045 / DR1)ACISD03817UniProtKB/TrEMBL D8JJ98ribonuclease PH COG0689 RNase PH
BMoraxella catarrhalis (strain RH4)MORCR01369UniProtKB/TrEMBL D5VD92ribonuclease PH
BPsychrobacter arcticus (strain DSM 17307 / 273-4)PSYA201843UniProtKB/Swiss-Prot RNPH_PSYA2Ribonuclease PH
BPsychrobacter cryohalolentis (strain K5)PSYCK02133UniProtKB/Swiss-Prot RNPH_PSYCKRNAse PH
BPsychrobacter sp. (strain PRwf-1)PSYWF02124UniProtKB/Swiss-Prot RNPH_PSYWFRibonuclease PH
BAzotobacter vinelandii (strain DJ / ATCC BAA-1303)AZOVD00276UniProtKB/Swiss-Prot RNPH_AZOVDribonuclease PH
BCellvibrio japonicus (strain Ueda107)CELJU00200UniProtKB/Swiss-Prot RNPH_CELJURibonuclease PH
BPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)PSEAE05321UniProtKB/Swiss-Prot RNPH_PSEAERibonuclease PH
BPseudomonas aeruginosa (strain LESB58)PSEA805701UniProtKB/Swiss-Prot RNPH_PSEA8Ribonuclease PH
BPseudomonas aeruginosa (strain PA7)PSEA705990UniProtKB/Swiss-Prot RNPH_PSEA7Ribonuclease PH
BPseudomonas aeruginosa (strain UCBPP-PA14)PSEAB05647UniProtKB/Swiss-Prot RNPH_PSEABribonuclease PH
BPseudomonas brassicacearum (strain NFM421)PSEBN05926UniProtKB/TrEMBL F2K6X8ribonuclease PH
BPseudomonas entomophila (strain L48)PSEE405044UniProtKB/TrEMBL Q1I2T6ribonuclease PH (RNase PH), tRNA nucleotidyltransferase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme
BPseudomonas fluorescens (strain Pf0-1)PSEPF05521UniProtKB/Swiss-Prot RNPH_PSEPFribonuclease PH
BPseudomonas fluorescens (strain SBW25)PSEFS05852UniProtKB/Swiss-Prot RNPH_PSEFS
BPseudomonas fulva (strain 12-X)PSEF100291UniProtKB/TrEMBL F6AF80Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: pfl:PFL_6059 ribonuclease PH
BPseudomonas mendocina (strain NK-01)PSEMN04713UniProtKB/TrEMBL F4DQZ2ribonuclease PH
BPseudomonas mendocina (strain ymp)PSEMY04327UniProtKB/Swiss-Prot RNPH_PSEMYRibonuclease PH
BPseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF505936UniProtKB/Swiss-Prot RNPH_PSEF5tRNA nucleotidyltransferase identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BPseudomonas putida (strain BIRD-1)PSEPB04921ncbi logo ADR62634.1Rph Ribonuclease PH
BPseudomonas putida (strain F1 / ATCC 700007)PSEP105136UniProtKB/Swiss-Prot RNPH_PSEP1Ribonuclease PH
BPseudomonas putida (strain GB-1)PSEPG05294UniProtKB/Swiss-Prot RNPH_PSEPGribonuclease PH unknown EC_number=2.7.7.56 KEGG: pen:PSEEN5439 ribonuclease PH (RNase PH), tRNA nucleotidyltransferase TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPseudomonas putida (strain KT2440)PSEPK05186UniProtKB/Swiss-Prot RNPH_PSEPKRibonuclease PH
BPseudomonas putida (strain W619)PSEPW00179UniProtKB/Swiss-Prot RNPH_PSEPWRibonuclease PH
BPseudomonas stutzeri (strain A1501)PSEU500458UniProtKB/Swiss-Prot RNPH_PSEU5Ribonuclease PH
BPseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)PSEUT00490UniProtKB/TrEMBL F8H7Y7ribonuclease PH
BPseudomonas syringae pv. syringae (strain B728a)PSEU200211UniProtKB/Swiss-Prot RNPH_PSEU2RNAse PH
BPseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)PSE1400185UniProtKB/TrEMBL Q48Q13ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BPseudomonas syringae pv. tomato (strain DC3000)PSESM00064UniProtKB/Swiss-Prot RNPH_PSESMRibonuclease PH
BFrancisella noatunensis subsp. orientalis (strain Toba 04)FRANT00337UniProtKB/TrEMBL I2AXL7tRNA nucleotidyltransferase COG0689;RIBONUCLEASE_PH;(PatternScan:IPR018336);Rib onuclease PH, conserved site;RNase_PH;(HMMPfam:IPR001247);Exoribonuclease, phosphorolytic domain 1;Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396);RNase_PH_C;(HMMPfam:IPR015847);Exoribonucleas e, phosphorolytic domain 2;Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396);RNasePH: ribonuclease PH;(HMMTigr:IPR002381);Ribonuclease phosphorolytic, bacterial-type;Molecular Function: tRNA binding (GO:0000049), Molecular Function: tRNA-specific ribonuclease activity (GO:0004549), Biological Process: tRNA processing (GO:0008033)
BFrancisella cf. novicida (strain 3523)FRACN00351UniProtKB/TrEMBL F4BJ64Ribonuclease PH
BFrancisella cf. novicida (strain Fx1)FRACF00374ncbi logo AEB27327.1Ribonuclease PH
BFrancisella tularensis subsp. novicida (strain U112)FRATN00379UniProtKB/Swiss-Prot RNPH_FRATNribonuclease PH
BFrancisella philomiragia subsp. philomiragia (strain ATCC 25017)FRAP200431UniProtKB/Swiss-Prot RNPH_FRAP2tRNA nucleotidyltransferase
BFrancisella tularensis subsp. holarctica (strain FTNF002-00 / FTA)FRATF00275UniProtKB/Swiss-Prot RNPH_FRATFRibonuclease PH
BFrancisella tularensis subsp. holarctica (strain LVS)FRATH00317UniProtKB/Swiss-Prot RNPH_FRATHRibonuclease PH
BFrancisella tularensis subsp. holarctica (strain OSU18)FRATO00264UniProtKB/Swiss-Prot RNPH_FRATOTRNA nucleotidyltransferase
BFrancisella tularensis subsp. mediasiatica (strain FSC147)FRATM00355UniProtKB/Swiss-Prot RNPH_FRATMRibonuclease PH
BFrancisella tularensis subsp. tularensis (strain FSC 198)FRAT100824UniProtKB/Swiss-Prot RNPH_FRAT1Ribonuclease PH Similar to P03842 Ribonuclease PH from Escherichia coli (238 aa). FASTA: opt: 997 Z-score: 1218.8 bits: 232.9 E(): 5.4e-60 Smith-Waterman score: 997; 65.665identity in 233 aa overlap.
BFrancisella tularensis subsp. tularensis (strain NE061598)FRATE00808ncbi logo ADA78541.1Ribonuclease PH
BFrancisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)FRATT00824UniProtKB/Swiss-Prot RNPH_FRATTRibonuclease PH Similar to P03842 Ribonuclease PH from Escherichia coli (238 aa). FASTA: opt: 997 Z-score: 1218.8 bits: 232.9 E(): 5.4e-60 Smith-Waterman score: 997; 65.665identity in 233 aa overlap.
BFrancisella tularensis subsp. tularensis (strain WY96-3418)FRATW01033UniProtKB/Swiss-Prot RNPH_FRATWRibonuclease PH
BCycloclasticus sp. (strain P1)CYCSP01828UniProtKB/TrEMBL K0C5Z7Ribonuclease PH
BMethylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7)METFJ01300UniProtKB/TrEMBL I1YHU2Ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BMethylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)METNJ02956UniProtKB/TrEMBL I1XN62Ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BThioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1)THICA00023UniProtKB/TrEMBL F6DB59Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: tau:Tola_0187 ribonuclease PH
BVibrio fischeri (strain ATCC 700601 / ES114)VIBF100109UniProtKB/Swiss-Prot RNPH_VIBF1ribonuclease PH
BVibrio fischeri (strain MJ11)VIBFM00108UniProtKB/Swiss-Prot RNPH_VIBFMRibonuclease PH
BAliivibrio salmonicida (strain LFI1238)ALISL00152UniProtKB/Swiss-Prot RNPH_ALISLRibonuclease PH
BPhotobacterium profundumPHOPR00176UniProtKB/Swiss-Prot RNPH_PHOPRputative ribonuclease PH predicted by orpheus program predicted by glimmer program pmp logo
BVibrio anguillarum (strain ATCC 68554 / 775)VIBA700355UniProtKB/TrEMBL F7YJ06Ribonuclease PH
BVibrio campbellii (strain ATCC BAA-1116 / BB120)VIBCB02164UniProtKB/TrEMBL A7MSP2ribonuclease PH RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
BVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)VIBCH00207UniProtKB/Swiss-Prot RNPH_VIBCHRibonuclease PH
BVibrio cholerae serotype O1 (strain MJ-1236)VIBCJ00360UniProtKB/TrEMBL C3NT04Ribonuclease PH
BVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)VIBC302412ncbi logo ABQ19876.1Ribonuclease PH
BVibrio cholerae serotype O1 (strain M66-2)VIBCM00194UniProtKB/TrEMBL C3LQH3
BVibrio furnissii (strain DSM 14383 / NCTC 11218)VIBFN00154UniProtKB/TrEMBL F0LPJ6ribonuclease PH COG0689
BVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)VIBPA00177UniProtKB/Swiss-Prot RNPH_VIBPARibonuclease PH
BVibrio sp. (strain Ex25)VIBSE00218ncbi logo ACY49990.1ribonuclease PH
BVibrio splendidus (strain LGP32)VIBSL00152ncbi logo CAV17209.1Ribonuclease PH
BVibrio vulnificus (strain CMCP6)VIBVU00783UniProtKB/Swiss-Prot RNPH_VIBVURibonuclease PH
BVibrio vulnificus (strain MO6-24/O)VIBVM02814ncbi logo ADV87849.1ribonuclease PH
BVibrio vulnificus (strain YJ016)VIBVY00277UniProtKB/Swiss-Prot RNPH_VIBVYRibonuclease PH
BFrateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370)FRAAD00388UniProtKB/TrEMBL H8L3U4ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BPseudoxanthomonas spadix (strain BD-a59)PSEUP02490UniProtKB/TrEMBL G7UT96ribonuclease PH COG0689 RNase PH
BPseudoxanthomonas suwonensis (strain 11-1)PSEUU00528UniProtKB/TrEMBL E6WQE3ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: xal:XALc_0795 hypothetical ribonuclease ph protein; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BStenotrophomonas maltophilia (strain K279a)STRMK03613UniProtKB/Swiss-Prot RNPH_STRMKPutative ribonuclease PH
BStenotrophomonas maltophilia (strain R551-3)STRM503251UniProtKB/Swiss-Prot RNPH_STRM5Ribonuclease PH
BXanthomonas albilineans (strain GPE PC73 / CFBP 7063)XANAP00766UniProtKB/TrEMBL D2UCI6hypothetical ribonuclease ph protein
BXanthomonas campestris pv. campestris (strain 8004)XANC800926UniProtKB/Swiss-Prot RNPH_XANC8ribonuclease PH
BXanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)XANCP03156UniProtKB/Swiss-Prot RNPH_XANCPRibonuclease PH
BXanthomonas campestris pv. campestris (strain B100)XANCB00932UniProtKB/Swiss-Prot RNPH_XANCBRibonuclease PH
BXanthomonas axonopodis pv. citri (strain 306)XANAC03300UniProtKB/Swiss-Prot RNPH_XANACRibonuclease PH
BXanthomonas campestris pv. vesicatoria (strain 85-10)XANC503429UniProtKB/Swiss-Prot RNPH_XANC5ribonuclease PH
BXanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)XANOR01064UniProtKB/TrEMBL Q5H3S4ribonuclease PH identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark pmp logo
BXanthomonas oryzae pv. oryzae (strain MAFF 311018)XANOM00989UniProtKB/Swiss-Prot RNPH_XANOMRibonuclease PH Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker
BXanthomonas oryzae pv. oryzae (strain PXO99A)XANOP03589UniProtKB/Swiss-Prot RNPH_XANOPRibonuclease PH
BXylella fastidiosa (strain 9a5c)XYLFA01473UniProtKB/Swiss-Prot RNPH_XYLFARibonuclease PH
BXylella fastidiosa (strain M12)XYLFM00742UniProtKB/Swiss-Prot RNPH_XYLFMtRNA nucleotidyltransferase
BXylella fastidiosa (strain M23)XYLF200720UniProtKB/Swiss-Prot RNPH_XYLF2Ribonuclease PH
BXylella fastidiosa (strain Temecula1 / ATCC 700964)XYLFT00674UniProtKB/Swiss-Prot RNPH_XYLFTRibonuclease PH
BXylella fastidiosa (strain GB514)XYLFG01676ncbi logo ADN63731.1ribonuclease PH COG0689 RNase PH
BSimiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)SIMAS02475UniProtKB/TrEMBL K4KL28ribonuclease PH COG0689 RNase PH
BBacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)BACMS03030ncbi logo CBW27972.1Ribonuclease PH
BBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)BDEBA02468UniProtKB/Swiss-Prot RNPH_BDEBARibonuclease PH
BDesulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14)DESB200485UniProtKB/TrEMBL E1QE78ribonuclease PH COGs: COG0689 RNase PH; InterProIPR001247:IPR015847:IPR020568:IPR002381:IPR 018336; KEGG: cko:CKO_05101 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: A8ARN1 Ribonuclease PH; TIGRFAM: ribonuclease PH; manually curated; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3)DESPD00791UniProtKB/TrEMBL E8RED2RNAse PH COGs: COG0689 RNase PH; InterPro IPR001247: IPR015847: IPR002381: IPR018336; KEGG: dps:DP1273 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfocapsa sulfexigens (strain DSM 10523 / SB164P1)DESSD00082UniProtKB/TrEMBL M1N9Z4RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfotalea psychrophila (strain LSv54 / DSM 12343)DESPS01273UniProtKB/Swiss-Prot RNPH_DESPSRibonuclease PH
BGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)GEOBB01188UniProtKB/TrEMBL B5EHL3Ribonuclease PH
BGeobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)GEODF02986UniProtKB/Swiss-Prot RNPH_GEODFribonuclease PH KEGG: gur:Gura_2256 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGeobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)GEOLS01984UniProtKB/Swiss-Prot RNPH_GEOLSRibonuclease PH
BGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)GEOMG01846UniProtKB/Swiss-Prot RNPH_GEOMGribonuclease PH
BGeobacter sp. (strain M18)GEOS801026UniProtKB/TrEMBL E8WLF0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: gem:GM21_3070 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGeobacter sp. (strain M21)GEOSM03000UniProtKB/TrEMBL C6E3A6Ribonuclease PH
BGeobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)GEOSL01768UniProtKB/Swiss-Prot RNPH_GEOSLRibonuclease PH
BGeobacter sulfurreducens (strain DL-1 / KN400)GEOSK01725ncbi logo ADI84630.2ribonuclease PH
BGeobacter uraniireducens (strain Rf4)GEOUR02155UniProtKB/Swiss-Prot RNPH_GEOURRibonuclease PH
BPelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)PELCD02165UniProtKB/TrEMBL Q3A2Y6Ribonuclease PH
BPelobacter propionicus (strain DSM 2379)PELPD02191UniProtKB/TrEMBL A1ARE8ribonuclease PH KEGG: gme:Gmet_1876 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BStigmatella aurantiaca (strain DW4/3-1)STIAD02796UniProtKB/TrEMBL E3FMM5Ribonuclease PH
BAnaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)ANAD203464UniProtKB/Swiss-Prot RNPH_ANAD2Ribonuclease PH
BAnaeromyxobacter dehalogenans (strain 2CP-C)ANADE03348UniProtKB/Swiss-Prot RNPH_ANADEribonuclease PH
BAnaeromyxobacter sp. (strain Fw109-5)ANADF03384UniProtKB/Swiss-Prot RNPH_ANADFRibonuclease PH
BAnaeromyxobacter sp. (strain K)ANASK03403UniProtKB/Swiss-Prot RNPH_ANASKRibonuclease PH
BCorallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2)CORCM02000UniProtKB/TrEMBL H8MHM8ribonuclease PH
BMyxococcus fulvus (strain ATCC BAA-855 / HW-1)MYXFH03501UniProtKB/TrEMBL F8CQD6ribonuclease PH COG0689 RNase PH
BMyxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8)MYXSD02255UniProtKB/TrEMBL L7UAX8ribonuclease PH
BMyxococcus xanthus (strain DK 1622)MYXXD01922UniProtKB/Swiss-Prot RNPH_MYXXDribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)HALO100563UniProtKB/TrEMBL D0LLI8ribonuclease PH KEGG: azo:azo3963 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSorangium cellulosum (strain So ce56)SORC507941UniProtKB/TrEMBL A9FGR1Ribonuclease PH
BDesulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)DESAR01494UniProtKB/TrEMBL F2NHR4Ribonuclease PH COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR002381:IPR001247:IPR015847; KEGG: gka:GK2666 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; IMG reference gene:2504155088; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1)DESTA00302UniProtKB/TrEMBL I4C0G5RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSyntrophus aciditrophicus (strain SB)SYNAS01578UniProtKB/Swiss-Prot RNPH_SYNASribonuclease PH
BSpirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228)SPISS02319UniProtKB/TrEMBL E1R1V8ribonuclease PH COGs: COG0689 RNase PH; InterPro IPR018336:IPR001247:IPR015847:IPR002381; KEGG: pst:PSPTO_0077 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSpirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1)SPITD01326UniProtKB/TrEMBL E0RU84Ribonuclease PH
BSpirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203)SPITZ01467UniProtKB/TrEMBL G0GAE5ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; COGs: COG0689 RNase PH; InterPro IPR001247:IPR015847:IPR002381; KEGG: sta:STHERM_c13650 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; SPTR: RNAse PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type
BAminobacterium colombiense (strain DSM 12261 / ALA-1)AMICL00286UniProtKB/TrEMBL D5ED07Ribonuclease PH
BThermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883)THEAS01511UniProtKB/TrEMBL D1B6W2ribonuclease PH KEGG: gsu:GSU1795 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)THEID01655UniProtKB/TrEMBL F8AB93ribonuclease PH COGs: COG0689 RNase PH; InterPro IPR002381:IPR018336:IPR001247:IPR015847; KEGG: gsu:GSU1795 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; IMG reference gene:2505285015; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BThermodesulfobacterium geofontis (strain OPB45)THEGP01118UniProtKB/TrEMBL F8C684Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: bmq:BMQ_4704 ribonuclease PH
BOpitutus terrae (strain DSM 11246 / PB90-1)OPITP04174UniProtKB/TrEMBL B1ZNZ4Ribonuclease PH
BCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)CORAD02983UniProtKB/TrEMBL D5EHY3Ribonuclease PH
BAkkermansia muciniphila (strain ATCC BAA-835)AKKM800387UniProtKB/TrEMBL B2UNC2Ribonuclease PH
BThermobaculum terrenum (strain ATCC BAA-798 / YNP1)THET100761UniProtKB/TrEMBL D1CFI4Ribonuclease PH