List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 9482

G-D-S-L family
This group has 5 members: 5 [B]acteria
Fingerprint: DYPDAMI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Solibacter usitatus (strain Ellin6076)SOLUE05631  UniProtKB/TrEMBL Q01UG4  lipolytic enzyme, G-D-S-L family PFAM: lipolytic enzyme, G-D-S-L family KEGG: rba:RB3639 hypothetical protein
[B] Bacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD03871  UniProtKB/TrEMBL Q62NX1  Molecular Function: structural molecule activity (GO:0005198), Cellular Component: microtubule (GO:0005874), Biological Process: microtubule-based movement (GO:0007018) Carbohydrate Esterase Family 12, putative beta-tubulin
[B] Oceanobacillus iheyensisOCEIH02076  UniProtKB/TrEMBL Q8EPL7  CDS_ID OB2084 hypothetical protein
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH02694  UniProtKB/TrEMBL A9KNH9  Lipolytic protein G-D-S-L family
[B] Sorangium cellulosum (strain So ce56)SORC501489  UniProtKB/TrEMBL A9FCB9  Probable lysophospholipase L1 and related esterases/probable similar to rhamnogalacturonan acetylesterase